BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03094 (UTR included)
(4339 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054A1H02 763 0.0
BF14_3101_C2 84 2e-15
BF01038B1H07 74 2e-12
BF01060B2A12 72 8e-12
>BF01054A1H02
Length = 850
Score = 763 bits (385), Expect = 0.0
Identities = 456/478 (95%), Gaps = 5/478 (1%)
Strand = Plus / Plus
Query: 3867 tgatctgccgttattacatgagacagaactatacgaaaaacgatattataggtagtaaaa 3926
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 12 tgatctgccgttattacatgagacagaactaaacgaaaaacgatattataggtagtaaaa 71
Query: 3927 attaattgtacgtggaggcaatccgcgcggaatgaagttgtaataaaaacaggaagaggt 3986
||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 72 attaattgtacgtggagtcaatccgcggggaatgaagttgtaatgaaaacaggaagaggt 131
Query: 3987 agaaattgatttttaaggatttttcagtgtttctttaaggcaaactttattaacattact 4046
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 132 agaaattgatttttaaggatttttcagtgtttctttaagacaaactttattaacattact 191
Query: 4047 tacaagtcactattaatatcctgcgtgcattccgtctcgctctgtctctcccccctcctt 4106
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tacaagccacaattaatatcctgcgtgcattccgtctcgctctgtctctcccccctcctt 251
Query: 4107 ctcatagcgttaaacgtttaacgcaaccatgttggaagtcgcataagaagtttcacttca 4166
| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cccatagcgttaaacgtttagcgcaaccatgttggaagtcgcataagaagtttcacttca 311
Query: 4167 ataaaa---tgtcattgaaggtatatgagagatcatcacataaattttaaatattttttt 4223
|||||| || || |||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 312 ataaaatcttgaagctgtaggtatatgagagaatatcacgtaaattttaaatattttttt 371
Query: 4224 t--aaacaaacaaaaaaagctctttttatttcaaaactgttttagaacgaatctcgatat 4281
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttaaaacaaacaaaaaaagctctttttatttcaaaactgttttagaacgaatctcgatat 431
Query: 4282 ttgacatcaagctgtcaaaacaatacaaacgatccctgtcatgtgatattaatggtag 4339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ttgacatcaagctgtcaaaacaatacaaacgatccctgtcatgtgatattaatggtag 489
>BF14_3101_C2
Length = 1325
Score = 83.8 bits (42), Expect = 2e-15
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 4109 catagcgttaaacgtttaacgcaaccatgttggaagtcgcataagaagtttcacttcaat 4168
|||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||
Sbjct: 412 catagcgttaaacgttaaacgcaacctagtaagaagtcgcataagaagtttcacttcaat 471
Query: 4169 aa 4170
||
Sbjct: 472 aa 473
>BF01038B1H07
Length = 768
Score = 73.8 bits (37), Expect = 2e-12
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 4111 tagcgttaaacgtttaacgcaaccatgttggaagtcgcataagaagtttcacttcaa 4167
||||||| |||||||||||||||| ||||| | ||||||| ||||||||||||||||
Sbjct: 596 tagcgttgaacgtttaacgcaaccttgttgaatgtcgcattagaagtttcacttcaa 540
>BF01060B2A12
Length = 811
Score = 71.9 bits (36), Expect = 8e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 4109 catagcgttaaacgtttaacgcaaccatgttggaagtcgcataagaagtttcacttcaat 4168
|||||||||||||||| ||||||||| || ||||||||||||||| ||||||||||||
Sbjct: 570 catagcgttaaacgttaaacgcaacctagtaagaagtcgcataagaaatttcacttcaat 629
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 371,683
Number of extensions: 6747
Number of successful extensions: 6747
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 6746
Number of HSP's successfully gapped: 5
Length of query: 4339
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4321
Effective length of database: 8,109,745
Effective search space: 35042208145
Effective search space used: 35042208145
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)