BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03099 (UTR included)
(1480 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1933_C1 981 0.0
>BF14_1933_C1
Length = 554
Score = 981 bits (495), Expect = 0.0
Identities = 507/511 (99%)
Strand = Plus / Plus
Query: 491 aggcatcaaaatgacgaactccaaaggttaccgccgtggaaccagggacttgttcgcccg 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 aggcatcaaaatgacgaactccaaaggttaccgccgtggaaccagggacttgttcgcccg 73
Query: 551 caggttccgtacccatggcaccatccctctatctacttatatgaaagtatacaaagtcgg 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 caggttccgtacccatggcaccatccctctatctacttatatgaaagtatacaaagtcgg 133
Query: 611 tgacatcgtcgacattaggggcaatggtgcagtccaaaagggtatgccacacaaagttta 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tgacatcgtcgacattaggggcaatggtgcagtccaaaagggtatgccacacaaagttta 193
Query: 671 ccacggaaagaccggtcgagtgtacaacgtcacagctcacgctcttggagtcatcgtgaa 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ccacggaaagaccggtcgagtgtacaacgtcacagctcacgctcttggagtcatcgtgaa 253
Query: 731 caagaaggttggtggaaggatcatccccaagaggatcaacatccgcattgaacacgtcaa 790
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 caagaaggttgggggaaggatcatccccaagaggatcaacatccgcattgaacacgtcaa 313
Query: 791 gcactccaagtgccgagaggacttcctcaagcgtgtgaaggaaaacgagaggttgctaaa 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gcactccaagtgccgagaggacttcctcaagcgtgtgaaggaaaacgagaggttgctaaa 373
Query: 851 ggaagccaaggctgccggaaaggtcataaacctcaagagacaaccacagcccccaagggc 910
|||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 374 agaagccaaggctgccggaaaggtcataaaccttaagagacaaccacagccccccagggc 433
Query: 911 tgcccacattgtcagcggtacagagaaaccagtcctgctcgctcctattccatacgagtt 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tgcccacattgtcagcggtacagagaaaccagtcctgctcgctcctattccatacgagtt 493
Query: 971 tgtagcctaaagtgaaatatattatttgtaa 1001
|||||||||||||||||||||||||||||||
Sbjct: 494 tgtagcctaaagtgaaatatattatttgtaa 524
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 255,799
Number of extensions: 6518
Number of successful extensions: 6518
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6518
Number of HSP's successfully gapped: 1
Length of query: 1480
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1463
Effective length of database: 8,119,229
Effective search space: 11878432027
Effective search space used: 11878432027
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)