BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03116 (UTR included)
(2788 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2630_C1 1193 0.0
BF14_203_C1 119 3e-26
>BF14_2630_C1
Length = 2383
Score = 1193 bits (602), Expect = 0.0
Identities = 608/610 (99%)
Strand = Plus / Minus
Query: 1 ccgacagcacagcacttatgtagtggcactcgaaaatattgtccgcgaaaaattcatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 ccgacagcacagcacttatgtagtggcactcgaaaatattgtccgcgaaaaattcatttt 802
Query: 61 acaccgcgagtgatcatgtcaaataacattattcaatcgacatgcgtcggtggctgtttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 acaccgcgagtgatcatgtcaaataacattattcaatcgacatgcgtcggtggctgtttc 742
Query: 121 gtacgaatgaatgatttaacttacgtatacggtacggaattagtaacacattattaatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtacgaatgaatgatttaacttacgtatacggtacggaattagtaacacattattaatac 682
Query: 181 aaggagcacacattggcacccatatgtcgcaaatactacggcgagcggttccatatttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaggagcacacattggcacccatatgtcgcaaatactacggcgagcggttccatatttag 622
Query: 241 accgacttcagcgcattctatcggtattctataaaaacatttcagcacaactgttttatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 accgacttcagcgcattctatcggtattctataaaaacatttcagcacaactgttttatc 562
Query: 301 gactaaaccaataaaaacaaggtgaataggaaggaagtttttccaatcagctatatgtta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gactaaaccaataaaaacaaggtgaataggaaggaagtttttccaatcagctatatgtta 502
Query: 361 acaagttgtataaaacctttttgcatttaacatttatttgttatcaatctatatgtaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaagttgtataaaacctttttgcatttaacatttatttgttatcaatctatatgtaaca 442
Query: 421 tcaaaacatgtcaaactgaatgtcgattttgatattgtatttttgattgtaaaatgtatt 480
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaaaacatgtcaaacggaatgtcgattttgatattgtatttttgattgtaaaatgtatt 382
Query: 481 tttaataactgaaagaaataatgcctccgaaagcgaaagagtctgcaacaaaaaagccgg 540
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaaaaactgaaagaaataatgcctccgaaagcgaaagagtctgcaacaaaaaagccgg 322
Query: 541 tccctcaagttcttcgtcccagtattagcgattccagtctaaatcaagtacccgatgatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccctcaagttcttcgtcccagtattagcgattccagtctaaatcaagtacccgatgatg 262
Query: 601 cgattgaagg 610
||||||||||
Sbjct: 261 cgattgaagg 252
>BF14_203_C1
Length = 1373
Score = 119 bits (60), Expect = 3e-26
Identities = 63/64 (98%)
Strand = Plus / Plus
Query: 2606 atacgctgttggtattggaaacatatggaggtttccatatctatgttacaggaatggggg 2665
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 atacgctgttggtattggaaacatatggaggcttccatatctatgttacaggaatggggg 60
Query: 2666 cggt 2669
||||
Sbjct: 61 cggt 64
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 324,935
Number of extensions: 12162
Number of successful extensions: 12162
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 12162
Number of HSP's successfully gapped: 2
Length of query: 2788
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2771
Effective length of database: 8,119,229
Effective search space: 22498383559
Effective search space used: 22498383559
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)