BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03132 (UTR included)
(1678 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020B2A02 1225 0.0
>BF01020B2A02
Length = 727
Score = 1225 bits (618), Expect = 0.0
Identities = 633/638 (99%)
Strand = Plus / Plus
Query: 274 agatggtacaagggaagatacctaatttgaacaaatgcaaggacatgtcggaattttttg 333
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 90 agatggtacaagggaagatacctaatttgaacaaatgcaaggacatgtcagaattttttg 149
Query: 334 ataaggcagctttattatcagagagtgaatttgaagatgatggtacgaaccaggttgttt 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ataaggcagctttattatcagagagtgaatttgaagatgatggtacgaaccaggttgttt 209
Query: 394 tgccacaaaagctgtcgaaccgagctgcagcgatgcacaccaagtcggcactcagacttg 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tgccacaaaagctgtcgaaccgagctgcagcgatgcacaccaagtcggcactcagacttg 269
Query: 454 tggagctcggaccaaggatgtcattgcagcttataaaggttgaagacggccttatggatg 513
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 270 tggagctcggaccaaggatgtcattgcagcttataaaggttgaggacggccttatggatg 329
Query: 514 gggaggttttgttccatgaactcgtagagaaaacggatgaggaaaaggccctgattaaga 573
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 330 gggaggttttgttccatgaactcgtagagaaaacggaagaggaaaaggccctgattaaga 389
Query: 574 agaaacgtgaagagaaacgacgcttgaaagagaagagaaaggcacagcaagcggagaaca 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 agaaacgtgaagagaaacgacgcttgaaagagaagagaaaggcacagcaagcggagaaca 449
Query: 634 ttaaacggaaggagaaggaaaaagaagaattaaaacaaaaagctttagagggaattaaaa 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ttaaacggaaggagaaggaaaaagaagaattaaaacaaaaagctttagagggaattaaaa 509
Query: 694 agaaacaggaaatgactgaaaatcaaaggttaatggagctggcggctgcggagactcagg 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 agaaacaggaaatgactgaaaatcaaaggttaatggagctggcggctgcggagactcagg 569
Query: 754 ataatgatcaggatgaagacgacgcggattactatcgacaggaagtgggagaggaaccgg 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ataatgatcaggatgaagacgacgcggattactatcgacaggaagtgggagaggaaccgg 629
Query: 814 aacaagatctattcagtcaaaatccaccccggaaaaggaaatctgatgacggagaggaag 873
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 630 aacaagatctattcagtcaaaatccatccaggaaaaggaaatctgatgacggagaggaag 689
Query: 874 ctaggggattcaagaagatgagattggataagaaatta 911
||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ctaggggattcaagaagatgagattggataagaaatta 727
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 300,506
Number of extensions: 8108
Number of successful extensions: 8108
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8108
Number of HSP's successfully gapped: 1
Length of query: 1678
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1661
Effective length of database: 8,119,229
Effective search space: 13486039369
Effective search space used: 13486039369
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)