BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03149 (UTR included)
(4009 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009A2A04 1388 0.0
BF01044B2B07 1061 0.0
BF01038B1H07 78 1e-13
BF14_729_C2 70 3e-11
>BF01009A2A04
Length = 712
Score = 1388 bits (700), Expect = 0.0
Identities = 709/712 (99%)
Strand = Plus / Plus
Query: 2010 gtacacagtgaaggaggagattttgacatacggcccatagatataagaaacttgagttac 2069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtacacagtgaaggaggagattttgacatacggcccatagatataagaaacttgagttac 60
Query: 2070 ttgggattctacacgtgtatcctggacacgatctcagctccagccgccatcttgcgctac 2129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgggattctacacgtgtatcctggacacgatctcagctccagccgccatcttgcgctac 120
Query: 2130 ctgtgttctgtgtatcgtgttcatgatataccgattgggaacaaccatacatttgacaac 2189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgtgttctgtgtatcgtgttcatgatataccgattgggaacaaccatacatttgacaac 180
Query: 2190 gtcgaaagagttccagacaagattaggttttacttcacagaaaagcatagaattagtgcg 2249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtcgaaagagttccagacaagattaggttttacttcacagaaaagcatagaattagtgcg 240
Query: 2250 cgagtgtcgtactacaaggtgcggtcgactacgaccatagaaataagaaacgcggatctg 2309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgagtgtcgtactacaaggtgcggtcgactacgaccatagaaataagaaacgcggatctg 300
Query: 2310 ttagcggacagtgttgattatgaatatgttaacgctttgaaatctcggttatctgaggta 2369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttagcggacagtgttgattatgaatatgttaacgctttgaaatctcggttatctgaggta 360
Query: 2370 caaaaagagaagacaaatttggagagtcaatacgaagcgagactgaatgtagaaggagat 2429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caaaaagagaagacaaatttggagagtcaatacgaagcgagactgaatgtagaaggagat 420
Query: 2430 aaactgaaagaaatagttggaaaaacaaaggagaagactgactcgttagagaagattaaa 2489
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 421 aaactgaaagaaatagttggaaaaacaaaggagaaggctgattcgttagagaagattaaa 480
Query: 2490 tccataaatctaaaaatacacttccaaaagcaaaaagttcttgcattagaaagcgaaccg 2549
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 481 tccataaatctaaaaatacacttccaaaagcaaaaagttcttgcattagaacgcgaaccg 540
Query: 2550 gccataaacatagaggcggaaaagaggaagtgcaaagaagataaacaagagtgcgtccac 2609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gccataaacatagaggcggaaaagaggaagtgcaaagaagataaacaagagtgcgtccac 600
Query: 2610 aaacagtgcgcagcgcagaaggagatgtacaacatattacaacacatacacgaggagaca 2669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaacagtgcgcagcgcagaaggagatgtacaacatattacaacacatacacgaggagaca 660
Query: 2670 gtcaacatggagaagaatacgattcacttatctgtacatagaaacgaattcg 2721
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtcaacatggagaagaatacgattcacttatctgtacatagaaacgaattcg 712
>BF01044B2B07
Length = 798
Score = 1061 bits (535), Expect = 0.0
Identities = 560/568 (98%), Gaps = 4/568 (0%)
Strand = Plus / Plus
Query: 3107 atcaagatggctgccaccgctggaaaatctagtgagtgagatcagagagaatttctcatc 3166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 atcaagatggctgccaccgctggaaaatctagtgagtgagatcagagagaatttctcatc 294
Query: 3167 catgttccagaagttggggtgtgtcggtgacgtcatactgtacaagggagccaatgatga 3226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 catgttccagaagttggggtgtgtcggtgacgtcatactgtacaagggagccaatgatga 354
Query: 3227 ggagttctcgtgttacgggctacacatcatggtgcagttccgtgttggtgagcgtctgcg 3286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ggagttctcgtgttacgggctacacatcatggtgcagttccgtgttggtgagcgtctgcg 414
Query: 3287 acagttgactagagacacacagtcgggcggggagagggcgttgtctacggccctatacct 3346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 acagttgactagagacacacagtcgggcggggagagggcgttgtctacggccctatacct 474
Query: 3347 ccttgctctacaggcaagggtcgctgtacccttcagatgtgtggatgaaatcaaccaagg 3406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ccttgctctacaggcaagggtcgctgtacccttcagatgtgtggatgaaatcaaccaagg 534
Query: 3407 aatggatgcgaagaatgaaagggacatgttacagttactgatcaaggcgaccactgaatc 3466
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aatggatgcaaagaatgaaagggacatgttacagttactgatcaaggcgaccactgaatc 594
Query: 3467 cgattcccagtacttcctcctcacaccaaaggtaacggactgatatactatgatatatat 3526
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 595 cgattcccagtacttcctcctcacaccaaaggtaacggactgatatactat----tatat 650
Query: 3527 atataagtatgggataatttttcagctaaatttctttaaatcagttagtttcttgtacag 3586
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 651 atataagtatgggataatttttcagctaaatttctttaattcagttcgtttcttgtacag 710
Query: 3587 taccataaaattgtttgattaaagtctttatatgtgtgtactaaattaacgaagcatgaa 3646
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 taccataaaattgtttgactaaagtctttatatgtgtgtactaaattaacgaagcatgaa 770
Query: 3647 attgttttgataaactgtatagatggaa 3674
||||||||||||||||||||||||||||
Sbjct: 771 attgttttgataaactgtatagatggaa 798
Score = 172 bits (87), Expect = 3e-42
Identities = 90/91 (98%)
Strand = Plus / Plus
Query: 3016 atagagagagggagataaggaatcttgaaaagaaattgagttcgtcgaccgacaccaaga 3075
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 atagagagagggagataaggaatcttgaaaagaaattgagttcatcgaccgacaccaaga 60
Query: 3076 aaatgataagagatgaaattaaaacgataac 3106
|||||||||||||||||||||||||||||||
Sbjct: 61 aaatgataagagatgaaattaaaacgataac 91
>BF01038B1H07
Length = 768
Score = 77.8 bits (39), Expect = 1e-13
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 3947 tttttgaagtgaaacttgtaatgcaacttccaacaaggttgcgttaaactttcaacgct 4005
||||||||||||||||| |||||| || | ||||||||||||||||||| |||||||||
Sbjct: 537 tttttgaagtgaaacttctaatgcgacattcaacaaggttgcgttaaacgttcaacgct 595
>BF14_729_C2
Length = 1289
Score = 69.9 bits (35), Expect = 3e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 3943 atactttttgaagtgaaacttgtaatgcaacttccaacaaggttgcgttaaactttcaac 4002
|||||||||| || |||||||||||||| | ||||||||||| ||||| |||| ||| ||
Sbjct: 852 atactttttggagggaaacttgtaatgcgaattccaacaaggctgcgtgaaacgttctac 911
Query: 4003 gctcctg 4009
|||||||
Sbjct: 912 gctcctg 918
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 452,350
Number of extensions: 12654
Number of successful extensions: 12654
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 12653
Number of HSP's successfully gapped: 5
Length of query: 4009
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3991
Effective length of database: 8,109,745
Effective search space: 32365992295
Effective search space used: 32365992295
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)