BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03153 (UTR included)
(1132 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 129 1e-29
BF01012A1B09 115 2e-25
BF01024A1H07 92 2e-18
BF14_729_C2 92 2e-18
BF01011A1H06 82 2e-15
BF01019B1G10 80 9e-15
BF01025A1D01 80 9e-15
BF01056A1B08 78 3e-14
BF01017A2H11 78 3e-14
BF01058B2C06 76 1e-13
BF01035X1C09 76 1e-13
BF01047B2B04 72 2e-12
BF01042A2B06 72 2e-12
BF01005B1E12 72 2e-12
BF01033B1B03 70 8e-12
BF01012B1C01 70 8e-12
BF01012A1E04 70 8e-12
BF14_2189_C1 68 3e-11
>BF14_729_C3
Length = 2041
Score = 129 bits (65), Expect = 1e-29
Identities = 87/93 (93%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 746 ctcgtctgcccgtggtcacggttgctgcaaagtaaccgaaacgtcgagagtatgtggttt 805
|||||||||||||| ||||||||||||||||||||||||||||||| || ||||| ||||
Sbjct: 1589 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgtagttt 1648
Query: 806 taaaataataaaaatccgcgtagtatatccgaa 838
| ||||||| |||||||||||||||||||||||
Sbjct: 1649 ttaaataat-aaaatccgcgtagtatatccgaa 1680
>BF01012A1B09
Length = 841
Score = 115 bits (58), Expect = 2e-25
Identities = 99/110 (90%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 753 gcccgtggtcacggttgctgcaaagtaaccgaaacgtcgagagtatgtggttttaaaata 812
||||||| |||||| ||||| |||||||||||||||||| || ||||| |||||||||||
Sbjct: 841 gcccgtgatcacggctgctgaaaagtaaccgaaacgtcgggattatgtagttttaaaata 782
Query: 813 ataaaaatccgcgtagtatatccgaaactatattagtatcatttgaatga 862
|| |||||||||||||| ||||||||| ||||||||| |||||| |||||
Sbjct: 781 at-aaaatccgcgtagtgtatccgaaa-tatattagtttcatttaaatga 734
>BF01024A1H07
Length = 726
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 744 atctcgtctgcccgtggtcacggttgctgcaaagtaaccgaaacgtcgagagtatgtggt 803
|||||||||||||||| |||||||||||| ||||||||||||||||| | ||||| |
Sbjct: 646 atctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcngnattatgtagn 705
Query: 804 tttaaaataataaaa 818
|||||||||||||||
Sbjct: 706 tttaaaataataaaa 720
>BF14_729_C2
Length = 1289
Score = 91.7 bits (46), Expect = 2e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 745 tctcgtctgcccgtggtcacggttgctgcaaagtaaccgaaacgtcgagagtatgtggtt 804
||||||||||||||| |||||||||||| |||||||||||||||||| |||||||| |||
Sbjct: 528 tctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcgggagtatgtagtt 587
Query: 805 tt 806
||
Sbjct: 588 tt 589
>BF01011A1H06
Length = 739
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 744 atctcgtctgcccgtggtcacggttgctgcaaagtaaccgaaacgtcgagagtatgt 800
|||||||||||||||| |||||||| ||| |||||||||||||||||| ||||||||
Sbjct: 459 atctcgtctgcccgtgatcacggttactgaaaagtaaccgaaacgtcgggagtatgt 515
>BF01019B1G10
Length = 488
Score = 79.8 bits (40), Expect = 9e-15
Identities = 87/100 (87%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 741 catatctcgtctgcccgtggtcacggttgctgcaaagtaaccgaaacgtcgagagtatgt 800
|||||||| |||||||||| |||||||| ||| |||| ||||||||||||| || |||||
Sbjct: 407 catatctcatctgcccgtgatcacggttactgaaaaggaaccgaaacgtcgggattatgt 348
Query: 801 -ggttttaaaataataaaaatccgcgtagtatatccgaaa 839
| |||||||||||| ||||| ||||||||| || |||||
Sbjct: 347 agtttttaaaataat-aaaattcgcgtagtaaatgcgaaa 309
>BF01025A1D01
Length = 764
Score = 79.8 bits (40), Expect = 9e-15
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 744 atctcgtctgcccgtggtcacggttgctgcaaagtaaccgaaacgtcg 791
|||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 485 atctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcg 438
>BF01056A1B08
Length = 761
Score = 77.8 bits (39), Expect = 3e-14
Identities = 100/119 (84%), Gaps = 1/119 (0%)
Strand = Plus / Minus
Query: 744 atctcgtctgcccgtggtcacggttgctgcaaagtaaccgaaacgtcgagagtatgtggt 803
|||||||| ||||||| ||||||| ||| |||| ||||||||||||| || | ||| ||
Sbjct: 242 atctcgtccgcccgtgaccacggttcctgaaaagcaaccgaaacgtcgggattgtgttgt 183
Query: 804 tttaaaataataaaaatccgcgtagtatatccgaaactatattagtatcatttgaatga 862
|||||||||||||||| |||| || | | |||||| ||||||||| |||||| |||||
Sbjct: 182 tttaaaataataaaaa-acgcgcagcacacccgaaaatatattagtttcatttaaatga 125
>BF01017A2H11
Length = 713
Score = 77.8 bits (39), Expect = 3e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 744 atctcgtctgcccgtggtcacggttgctgcaaagtaaccgaaacgtcgagagtat 798
|||||||||||||||| |||||||||||| ||||||||| |||||||| ||||||
Sbjct: 32 atctcgtctgcccgtgatcacggttgctgaaaagtaaccaaaacgtcgggagtat 86
>BF01058B2C06
Length = 772
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 743 tatctcgtctgcccgtggtcacggttgctgcaaagtaaccgaaacgtcgagagtatgtgg 802
||||||||||| ||||| |||||| ||| |||||||||||||||||||| || ||||| |
Sbjct: 484 tatctcgtctggccgtgatcacggctgcagcaaagtaaccgaaacgtcgggaatatgtag 425
Query: 803 ttttaa 808
||||||
Sbjct: 424 ttttaa 419
>BF01035X1C09
Length = 778
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 744 atctcgtctgcccgtggtcacggttgctgcaaagtaaccgaaacgt 789
||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 665 atctcgtcttcccgtgatcacggttgctgcaaagtaaccgaaacgt 620
>BF01047B2B04
Length = 762
Score = 71.9 bits (36), Expect = 2e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 744 atctcgtctgcccgtggtcacggttgctgcaaagtaaccgaaacgtcgagagtatgtggt 803
|||||| ||| ||||| ||||||||||||| |||||| |||||||||| |||||| | |
Sbjct: 220 atctcgcctgaccgtgatcacggttgctgcgaagtaaacgaaacgtcgggagtatttag- 162
Query: 804 tttaaaataataaaaa 819
||||||||||||||||
Sbjct: 161 tttaaaataataaaaa 146
>BF01042A2B06
Length = 781
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 763 acggttgctgcaaagtaaccgaaacgtcgagagtatgtggttttaaaa 810
||||||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct: 244 acggttgctgcgaagtaaccgaaacgtcgtgagtatgtagttttaaaa 291
>BF01005B1E12
Length = 657
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 744 atctcgtctgcccgtggtcacggttgctgcaaagtaaccgaaac 787
|||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 302 atctcgtctggccgtgatcacggttgctgcaaagtaaccgaaac 345
>BF01033B1B03
Length = 826
Score = 69.9 bits (35), Expect = 8e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 744 atctcgtctgcccgtggtcacggttgctgcaaagtaaccgaaacgtcgagagtat 798
|||||||||||| || |||||||||||||||||||||||||| |||| ||||||
Sbjct: 228 atctcgtctgcctatgatcacggttgctgcaaagtaaccgaaaagtcgggagtat 174
>BF01012B1C01
Length = 950
Score = 69.9 bits (35), Expect = 8e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 746 ctcgtctgcccgtggtcacggttgctgcaaagtaaccgaaacgtcgagagt 796
|||||||| ||||| |||||| |||||||||||||||||||||||| ||||
Sbjct: 654 ctcgtctgtccgtgatcacggctgctgcaaagtaaccgaaacgtcgggagt 704
>BF01012A1E04
Length = 841
Score = 69.9 bits (35), Expect = 8e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 816 aaaatccgcgtagtatatccgaaactatattagtatcatttgaatga 862
|||||||||||||||||||||||| ||||||||| |||||| |||||
Sbjct: 544 aaaatccgcgtagtatatccgaaaatatattagtttcatttaaatga 590
>BF14_2189_C1
Length = 1416
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 747 tcgtctgcccgtggtcacggttgctgcaaagtaaccgaaacgtcgagagtatgt 800
||||||| ||||| ||||||||||||||||||||| ||||||||| || |||||
Sbjct: 161 tcgtctgtccgtgatcacggttgctgcaaagtaacagaaacgtcgggactatgt 214
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 223,976
Number of extensions: 6678
Number of successful extensions: 6678
Number of sequences better than 1.0e-10: 18
Number of HSP's gapped: 6674
Number of HSP's successfully gapped: 18
Length of query: 1132
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1115
Effective length of database: 8,119,229
Effective search space: 9052940335
Effective search space used: 9052940335
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)