BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03170 (UTR included)
(4096 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1862_C1 1457 0.0
BF01055B2F03 109 4e-23
BF01029A1A09 78 1e-13
>BF14_1862_C1
Length = 965
Score = 1457 bits (735), Expect = 0.0
Identities = 776/791 (98%)
Strand = Plus / Plus
Query: 2779 ctttggctaaaagctttgcgttttgcttcaaccctgcgctgcaacctcgagccctcatag 2838
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2 ctttggctaaaagctttgcgttttgcttcaaccctgcgctgnnnnctcgagccctcatag 61
Query: 2839 tattcggttgtattagtaaaaacgtgacagacgatgacatgaagcagttactgaggatat 2898
|||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||
Sbjct: 62 tattcggttgtattagtaaaaacgtgacagacgacgatatgaagcaattactgaggatat 121
Query: 2899 tggtgaaggctttggaggtgttcaacgacctggcgctgctggaggctctcatcatgtgcc 2958
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 122 tggtgaaggctttggaggtgttcaacgacctggcgctgctggaggctctcatcatgtgtc 181
Query: 2959 tcaccaggctacagccgttactgcatccggagtctccaatccacgcagccttattctggg 3018
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 182 tcaccaggctacagccgttactgcatccggagtctcccatccacgcagccttattctggg 241
Query: 3019 tgtcactgtcagtacttcagctagacgagaccgcgctctacgcagctgggttggcgctca 3078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgtcactgtcagtacttcagctagacgagaccgcgctctacgcagctgggttggcgctca 301
Query: 3079 tggagcagaacctccacacactcgactcacaaggagcctttgataataagactttggagc 3138
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 302 tggagcagaacctccacacactcgactcgcaaggagcctttgataataagactttggagc 361
Query: 3139 aagttatgatggagacgagagagcctctggagtggcatttcaaacaattggaccatgctg 3198
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 362 aagttatgatggagacgagagagcctctggagtggcatttcaaactattggaccatgctg 421
Query: 3199 tggggctcagtttccgttctaacttccacttcgccctggtcggacacctgttgaagggct 3258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tggggctcagtttccgttctaacttccacttcgccctggtcggacacctgttgaagggct 481
Query: 3259 tccgtcatccagcagctggaactgtctccaggacttgcagagtgctggcagctctgctag 3318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tccgtcatccagcagctggaactgtctccaggacttgcagagtgctggcagctctgctag 541
Query: 3319 cgctcgccgctagacctaacagggacaagtttcagctgacacatcgcactgtcgcatacc 3378
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 542 cgctcgccgctagacctaacagggacaagtttcaactgacacatcgcactgtcgcatacc 601
Query: 3379 ttacggcgctggtgtgcgtgtctgaggaggttcgttctcgttgtcacgtcaagcactctc 3438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ttacggcgctggtgtgcgtgtctgaggaggttcgttctcgttgtcacgtcaagcactctc 661
Query: 3439 tccccaagtggcttcctgacaactgtgaccattactgtccatcatcggatcatcctcagt 3498
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 662 tccccaagtggcttcctgacaactgtgatcattattgtccatcatcggatcatcctcagt 721
Query: 3499 cctcgatgctgatacagccaacaactcactcctgtagcggtaggcggaaaacagaagaac 3558
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 722 cctcgatgctgatacagccaacaactcactcctgtagcggtaggcgtaaaacagaagaac 781
Query: 3559 acagcactggt 3569
|||||||||||
Sbjct: 782 acagcactggt 792
>BF01055B2F03
Length = 776
Score = 109 bits (55), Expect = 4e-23
Identities = 122/143 (85%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 125 tccattgcttgtgtggtgtcagggatcttctggttcacacggcttggtgctcgttccgcg 184
||||| || |||||||||||||| ||| ||||||||| |||| |||| | ||||||||
Sbjct: 601 tccatagcgtgtgtggtgtcaggagtctcctggttcacgcggcgcggtgttggttccgcg 660
Query: 185 gagtcagcggcgtctctcgttatatgatatcttatacatacaattatgttgccccggcga 244
|||||||||||||| ||||||||||||||| ||| |||||| ||||| |||||||||
Sbjct: 661 gagtcagcggcgtcactcgttatatgatattctatccatacagcgatgtt-ccccggcga 719
Query: 245 tgttcatttcttttttaacatgt 267
||||||||| |||| ||| ||||
Sbjct: 720 tgttcatttattttataatatgt 742
>BF01029A1A09
Length = 732
Score = 77.8 bits (39), Expect = 1e-13
Identities = 85/98 (86%), Gaps = 3/98 (3%)
Strand = Plus / Minus
Query: 1 aaccagaggtcccaggaaaactaggaaacttacttatatgtata-gataat--aagaatg 57
|||| ||||| |||||||||||| ||||| |||||||||||||| ||||| || |||
Sbjct: 98 aaccggaggttccaggaaaactacgaaacatacttatatgtatattataataaaaaaatt 39
Query: 58 acatattaaaacttacaacctctagctaagactacatg 95
||||||||||||||| ||||| || |||||||||||||
Sbjct: 38 acatattaaaacttataacctatacctaagactacatg 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 335,574
Number of extensions: 6910
Number of successful extensions: 6910
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6908
Number of HSP's successfully gapped: 3
Length of query: 4096
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4078
Effective length of database: 8,109,745
Effective search space: 33071540110
Effective search space used: 33071540110
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)