BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03171 (UTR included)
(1750 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060B1D11 135 3e-31
BF01047B2H03 96 2e-19
>BF01060B1D11
Length = 799
Score = 135 bits (68), Expect = 3e-31
Identities = 110/123 (89%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 27 ttttgggagcaatgtaacgacatcatcatggggtttccccaggatatgtatcttggaaac 86
||||||||| |||||| |||||||| ||||| ||||||| |||||||| ||||||||||
Sbjct: 485 ttttgggagtgatgtaatgacatcattatgggctttccccgggatatgtctcttggaaac 544
Query: 87 t--taggtgtttatagagatccgatggcctttttagatttatcccaaaactattgcgatc 144
| || |||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 545 tcttaagtgtttatagagctccgatggcctttttagactcatcccaaaactattgcgatc 604
Query: 145 cct 147
|||
Sbjct: 605 cct 607
>BF01047B2H03
Length = 758
Score = 95.6 bits (48), Expect = 2e-19
Identities = 96/111 (86%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 13 ggggcgtctctgtcttttgggagcaatgtaacgacatcatcatggggtttccccaggata 72
||||| ||||| | ||||| ||| |||||| |||||||| ||||| ||||||| |||||
Sbjct: 642 ggggcatctctattttttgagagtgatgtaatgacatcattatgggctttccccgggata 701
Query: 73 tgtatcttggaaa--cttaggtgtttatagagatccgatggcctttttaga 121
||| ||||||||| |||| |||||||||||| ||||||||||||||||||
Sbjct: 702 tgtctcttggaaactcttaagtgtttatagagctccgatggcctttttaga 752
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 197,262
Number of extensions: 8078
Number of successful extensions: 8078
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8076
Number of HSP's successfully gapped: 2
Length of query: 1750
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1733
Effective length of database: 8,119,229
Effective search space: 14070623857
Effective search space used: 14070623857
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)