BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN03180 (UTR included)
         (2620 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01012B1C01                                                           86   3e-16
BF01010B2B12                                                           74   1e-12
BF01018A2H04                                                           68   8e-11

>BF01012B1C01
          Length = 950

 Score = 85.7 bits (43), Expect = 3e-16
 Identities = 81/91 (89%), Gaps = 2/91 (2%)
 Strand = Plus / Plus

                                                                        
Query: 2513 ctgctgcaaagtaaccgaaacgtcgggagtgtgtagtt-aaaataataaaaaaaagcgta 2571
            |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||  ||||
Sbjct: 675  ctgctgcaaagtaaccgaaacgtcgggagtgtgtagttgaaactaataaaataactcgta 734

                                           
Query: 2572 gtaaatccgaaaatattcgttttatttaaat 2602
            || ||||  |||||||| |||| ||||||||
Sbjct: 735  gt-aatcgtaaaatattagtttcatttaaat 764


>BF01010B2B12
          Length = 786

 Score = 73.8 bits (37), Expect = 1e-12
 Identities = 74/86 (86%), Gaps = 4/86 (4%)
 Strand = Plus / Minus

                                                                        
Query: 2516 ctgcaaagtaaccgaaacgtcgggagtgtgtagttaaaataataaaaaaaag----cgta 2571
            ||||||||||||||||||||| ||||| ||||||| ||| ||| |||||||     | ||
Sbjct: 226  ctgcaaagtaaccgaaacgtctggagtatgtagtttaaaaaattaaaaaaaaaactcata 167

                                      
Query: 2572 gtaaatccgaaaatattcgttttatt 2597
            ||||||||||||||||| ||||||||
Sbjct: 166  gtaaatccgaaaatatttgttttatt 141


>BF01018A2H04
          Length = 679

 Score = 67.9 bits (34), Expect = 8e-11
 Identities = 62/70 (88%), Gaps = 1/70 (1%)
 Strand = Plus / Plus

                                                                        
Query: 2516 ctgcaaagtaaccgaaacgtcgggagtgtgtagttaaaataataaaaaaaagcgtagtaa 2575
            |||||||||||||||||| |||| ||| || || |||| |||| |||||| |||||||||
Sbjct: 283  ctgcaaagtaaccgaaacctcggcagtatgaagataaactaat-aaaaaacgcgtagtaa 341

                      
Query: 2576 atccgaaaat 2585
            ||||||||||
Sbjct: 342  atccgaaaat 351


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 354,288
Number of extensions: 7797
Number of successful extensions: 7797
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 7796
Number of HSP's successfully gapped: 3
Length of query: 2620
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2603
Effective length of database: 8,119,229
Effective search space: 21134353087
Effective search space used: 21134353087
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)