BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03182 (UTR included)
(2620 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 86 3e-16
BF01024A1H07 76 3e-13
BF01049B2H03 74 1e-12
BF01025A1D01 72 5e-12
BF01017A2H11 72 5e-12
BF01011A1H06 72 5e-12
BF14_729_C2 70 2e-11
BF14_729_C3 68 8e-11
>BF14_335_C2
Length = 1827
Score = 85.7 bits (43), Expect = 3e-16
Identities = 97/115 (84%)
Strand = Plus / Minus
Query: 2465 tatttgtgtattcgcgaattttaaagcgcgttgtgattatagagcttgcggttccttgcg 2524
||||| |||||||||||||||||||||||| | | | ||||||| | ||||||||||
Sbjct: 1274 tatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttccttgga 1215
Query: 2525 aaaccaacacccccaaagaccatgccatgaaggtcaataaataatacgagctcac 2579
| ||||||| ||||||| |||||||||| |||||||| || || || ||||||||
Sbjct: 1214 agaccaacatccccaaaaaccatgccatcaaggtcaacaagtattatgagctcac 1160
>BF01024A1H07
Length = 726
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 2371 acatctcgtgagcccgtgatcacggttgctgaaaagtaaccgaaac 2416
||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 644 acatctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaac 689
>BF01049B2H03
Length = 832
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 2262 ataatgagatctaagactttcacgagtattaattcaaatgaaactaatatttttcgg 2318
|||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||
Sbjct: 355 ataatgagatctaagattttagcgagtattcatttaaatgaaactaatatttttcgg 299
>BF01025A1D01
Length = 764
Score = 71.9 bits (36), Expect = 5e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 2373 atctcgtgagcccgtgatcacggttgctgaaaagtaaccgaaac 2416
||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 485 atctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaac 442
>BF01017A2H11
Length = 713
Score = 71.9 bits (36), Expect = 5e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 2369 tcacatctcgtgagcccgtgatcacggttgctgaaaagtaaccgaaac 2416
||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 28 tcacatctcgtctgcccgtgatcacggttgctgaaaagtaaccaaaac 75
>BF01011A1H06
Length = 739
Score = 71.9 bits (36), Expect = 5e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 2369 tcacatctcgtgagcccgtgatcacggttgctgaaaagtaaccgaaac 2416
||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 455 tcacatctcgtctgcccgtgatcacggttactgaaaagtaaccgaaac 502
>BF14_729_C2
Length = 1289
Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 2382 gcccgtgatcacggttgctgaaaagtaaccgaaac 2416
|||||||||||||||||||||||||||||||||||
Sbjct: 536 gcccgtgatcacggttgctgaaaagtaaccgaaac 570
>BF14_729_C3
Length = 2041
Score = 67.9 bits (34), Expect = 8e-11
Identities = 90/106 (84%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 2265 atgagatctaagactttcacgagtattaattcaaatgaaactaatatttttcggtttata 2324
||||||||||||| |||| |||||||| ||| ||||||| ||| |||| ||||| ||||
Sbjct: 1729 atgagatctaagattttcgcgagtattcatttaaatgaagctagtattattcgg-atata 1671
Query: 2325 ctgagcatatttaattattataaaaactacataattccgacgtttc 2370
|| || |||| |||||| ||||||||||||||| ||||||||||
Sbjct: 1670 ctacgcggattttattatt-taaaaactacataatcccgacgtttc 1626
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 315,295
Number of extensions: 6675
Number of successful extensions: 6675
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 6674
Number of HSP's successfully gapped: 8
Length of query: 2620
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2603
Effective length of database: 8,119,229
Effective search space: 21134353087
Effective search space used: 21134353087
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)