BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03183 (UTR included)
(2512 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2709_C1 2089 0.0
>BF14_2709_C1
Length = 1141
Score = 2089 bits (1054), Expect = 0.0
Identities = 1121/1141 (98%), Gaps = 3/1141 (0%)
Strand = Plus / Plus
Query: 1293 gaagtgtctcggtcttggtctgctttatatttactgtggtacgcgtatctatctacgctg 1352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagtgtctcggtcttggtctgctttatatttactgtggtacgcgtatctatctacgctg 60
Query: 1353 gttgtccgttgtaagtactatcacgcgtggctgctgtctgaggcaatatgtaacaactca 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttgtccgttgtaagtactatcacgcgtggctgctgtctgaggcaatatgtaacaactca 120
Query: 1413 gggatgggtttcaatggatatgacacgaatgggagcccaaaatgggataagatgtccaat 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gggatgggtttcaatggatatgacacgaatgggagcccaaaatgggataagatgtccaat 180
Query: 1473 atagatgtactgggatttgagctggctcagaacttccgcgcggctgtatcaagctggaac 1532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atagatgtactgggatttgagctggctcagaacttccgcgcggctgtatcaagctggaac 240
Query: 1533 aagaacacgaacgcctggctgcggttggtcgcatacagccgaggtggttggcggacgacg 1592
|||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 241 aagaacaccaacgcctggctgcggctggtcgcatacagccgaggtggttggcggacgacg 300
Query: 1593 cgagtgtacgctctgtctgcgatctggcacggcttccatcccggttactacttcactttc 1652
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 301 cgagtctacgctctgtctgcgatctggcacggcttccatcccggctactacttcactttc 360
Query: 1653 ttcgcgggaggtctcttcacagtcgctgccaagaaggtgcgatctttcgctcgtcccatg 1712
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcgcgggtggtctcttcacagtcgctgccaagaaggtgcgatctttcgctcgtcccatg 420
Query: 1713 tttgtggacagtaaacctaagaagatgttgtacgacgctctaaccttcataacgactcgc 1772
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 421 tttgtggacagtaaacctaagaagatgttgtacgacgctttgaccttcataacgactcgc 480
Query: 1773 gtcgccatgacgtacgccacagtgccatttattctactaaatctttcaccgacacttgct 1832
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtcgccatgacgtacgctacagtgccatttattctactaaatctttcaccgacacttgct 540
Query: 1833 ttttatggaaaattctactattcattgcattttattgctctgggtgcgctg-tttttgcc 1891
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 541 ttttatggaaaattctactattcattgcattttattgctctgggtgcgctgttttttgcc 600
Query: 1892 caataacaataaataccacacgtctcagatctccaattgtcctaatacgtcttccaaatt 1951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 caataacaataaataccacacgtctcagatctccaattgtcctaatacgtcttccaaatt 660
Query: 1952 aaaagaaattccggttcaggaaaccatagtggaggccaacggtaagatgaaggtgcgcta 2011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaaagaaattccggttcaggaaaccatagtggaggccaacggtaagatgaaggtgcgcta 720
Query: 2012 atataaaaataaagtttactgcgggtacgttgaatgatatgatgaaaataaaaaaatata 2071
||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 721 atatacagataaagtttactgcgggtacattgaatgatatgatgaaaataaaaaaatata 780
Query: 2072 tatatttacatttaaaaatagactatgcaatagttatccatgttttaggataaatgaata 2131
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 781 tatatttacatttaaaaatacacgatgcaatagttatccatgttttaggataaatgaata 840
Query: 2132 ttaatatgcatttatataccgacatatgccatatacaagtattatgtaaagcatctattt 2191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ttaatatgcatttatataccgacatatgccatatacaagtattatgtaaagcatctattt 900
Query: 2192 ttgcatgacttttatcgagttgatttttactatgttatgtgagtttctcataatgttact 2251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ttgcatgacttttatcgagttgatttttactatgttatgtgagtttctcataatgttact 960
Query: 2252 tgttgttga--tttttttttctattaagatacttttattaataaccgcgtacatataagc 2309
||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 961 tgttgttgatttttttttttctattaagatacttttactaataaccgcatacatataagc 1020
Query: 2310 ttattctgctgttatggaatatttttcaaaattttagcctcaataattcccatcacaaaa 2369
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1021 ttattctgctgttatggaatatttttcaaaattttagcctcaataattcccatcataaag 1080
Query: 2370 tatttattatataaagttttagtacacttatattaattcactaaatttaattaattaaat 2429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tatttattatataaagttttagtacacttatattaattcactaaatttaattaattaaat 1140
Query: 2430 g 2430
|
Sbjct: 1141 g 1141
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 372,065
Number of extensions: 8767
Number of successful extensions: 8767
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8765
Number of HSP's successfully gapped: 1
Length of query: 2512
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2495
Effective length of database: 8,119,229
Effective search space: 20257476355
Effective search space used: 20257476355
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)