BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03198 (UTR included)
(2374 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017B2C09 1328 0.0
>BF01017B2C09
Length = 694
Score = 1328 bits (670), Expect = 0.0
Identities = 688/694 (99%)
Strand = Plus / Plus
Query: 666 ctaccgctttacactcacacggagagcatcaacccacaagcaacccagaaggaaccggct 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctaccgctttacactcacacggagagcatcaacccacaagcaacccagaaggaaccggct 60
Query: 726 gagaaagtcgctaaggaccaagaagaggaattcgaagaagaagaagaggaaatcatcagg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagaaagtcgctaaggaccaagaagaggaattcgaagaagaagaagaggaaatcatcagg 120
Query: 786 aagccatcttctatcgctgagctgaaacggaaacagaccacagcggttgttctgttgggt 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagccatcttctatcgctgagctgaaacggaaacagaccacagcggttgttctgttgggt 180
Query: 846 gtcataggagctgagttcggccaagatatcgcctcggaaggtgccgctggaaataagaga 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtcataggagctgagttcggccaagatatcgcctcggaaggtgccgctggaaataagaga 240
Query: 906 cgcaaagacggtgacagtaggaagagttccatcgttgaaggtttcacacttagttcatcg 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgcaaagacggtgacagtaggaagagttccatcgttgaaggtttcacacttagttcatcg 300
Query: 966 aacaacctggcccgtctgacgtccttggcgctgactcacttactgctggcccctggttct 1025
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 301 aacaacctggcccgtctgacgtccttggcgctaactcacttactgctggcccctggttct 360
Query: 1026 gctcgccttcccgcacacacgccgctacgacgtgcggccattgacctcctcgggagagga 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctcgccttcccgcacacacgccgctacgacgtgcggccattgacctcctcgggagagga 420
Query: 1086 ttcgctgtttgggaaccgtatctcgacgtatctcatgtgctgttgggtctgttggagatg 1145
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 421 ttcgctgtttgggaaccgtatctcgacgtatctcatgtgctgctgggtctattggagatg 480
Query: 1146 tgttcggacgctgataaattagtgccttcgatgacgtacggtctgcctctcacaccgcag 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgttcggacgctgataaattagtgccttcgatgacgtacggtctgcctctcacaccgcag 540
Query: 1206 gcggactcctgtcgcaccgcgcggcacgcactcacacttatagcgacagcaagaccagcg 1265
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 541 gcggactcctgtcggaccgcgcggcacgcactcacacttatagcgacggcaagaccagcg 600
Query: 1266 gcgttcataacgactatggcccgtgaggtggcgagatgcgctgccgcccctgcgggcgct 1325
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gctttcataacgactatggcccgtgaggtggcgagatgcgctgccgcccctgcgggcgct 660
Query: 1326 ccgcccccgcccgccgcggttgcgctacagcgag 1359
||||||||||||||||||||||||||||||||||
Sbjct: 661 ccgcccccgcccgccgcggttgcgctacagcgag 694
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 230,243
Number of extensions: 4523
Number of successful extensions: 4523
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4523
Number of HSP's successfully gapped: 1
Length of query: 2374
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2357
Effective length of database: 8,119,229
Effective search space: 19137022753
Effective search space used: 19137022753
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)