BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03201 (UTR included)
(3397 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030B1A12 1370 0.0
BF01029B2A01 367 e-101
>BF01030B1A12
Length = 707
Score = 1370 bits (691), Expect = 0.0
Identities = 703/707 (99%)
Strand = Plus / Plus
Query: 451 attatttatagaaataagacactagtatactactcagaaaaaactttataatggaatttg 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attatttatagaaataagacactagtatactactcagaaaaaactttataatggaatttg 60
Query: 511 aatggaataattatttagaagatacaaaaactattgctgttcccgaagaattattttatc 570
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 61 aatggaataattatttagaagatacaaaaagtattgctgttcccgaagaattattttatc 120
Query: 571 acgttgaagccagcctcaacaatggtatcaagcaggggatgttactcgaggtgtgtcaca 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acgttgaagccagcctcaacaatggtatcaagcaggggatgttactcgaggtgtgtcaca 180
Query: 631 agaacaatcctgatgtatactggttggctgagatcacaatggtctgcggccacttgctta 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaacaatcctgatgtatactggttggctgagatcacaatggtctgcggccacttgctta 240
Query: 691 ggataaaattcattggtgcccagaccgacttttggtgtgatatatccagtactaaagtcc 750
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 241 ggataaaattcattggtgcccagaccgacttttggtgtgatatatccagtactaaagtac 300
Query: 751 accctctcggctggtgtggaaaatatgatgaattggttgagcctcccgatgagataaacg 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 accctctcggctggtgtggaaaatatgatgaattggttgagcctcccgatgagataaacg 360
Query: 811 aaagatgcggagaaactatcatagatataatgaaaaaagccctccttgttggacaatcgg 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 361 aaagatgcggagaaactatcatagatataatgaaaaaagccctccttgttggacagtcgg 420
Query: 871 tttcactcgaggcattgaataacaaagggatgtctccaatcgatcgaatcaaagttggga 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttcactcgaggcattgaataacaaagggatgtctccaatcgatcgaatcaaagttggga 480
Query: 931 tgaaagtggaaatacagaatataattgatccatacagatactggattgcaactgtgtgtg 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgaaagtggaaatacagaatataattgatccatacagatactggattgcaactgtgtgtg 540
Query: 991 aaaacattggaggtcggctcttgttgaggtatgatggagctgatgaagatttaccacagt 1050
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaaacattggaggccggctcttgttgaggtatgatggagctgatgaagatttaccacagt 600
Query: 1051 tttggatgttcttctgcaacaccagactcagcagctttggatttgtcaccaacaagggtt 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttggatgttcttctgcaacaccagactcagcagctttggatttgtcaccaacaagggtt 660
Query: 1111 ctccgtggcagttcaagtacccaggcaaagttaataaattctcgtgt 1157
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctccgtggcagttcaagtacccaggcaaagttaataaattctcgtgt 707
>BF01029B2A01
Length = 214
Score = 367 bits (185), Expect = e-101
Identities = 188/189 (99%)
Strand = Plus / Plus
Query: 2755 gccaggccttcatcatgctggacctacccatcataacgcacttcctgcacatgaagaagg 2814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccaggccttcatcatgctggacctacccatcataacgcacttcctgcacatgaagaagg 60
Query: 2815 agttcgctatgcagctctgcaaacacatcaccatgatacggtggtactacatcgacaact 2874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agttcgctatgcagctctgcaaacacatcaccatgatacggtggtactacatcgacaact 120
Query: 2875 tcgacgacaacgccgacatgtaataaccattcctattgtctagtacgaaataaaaatcat 2934
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcgacgacaacgccgacatgtgataaccattcctattgtctagtacgaaataaaaatcat 180
Query: 2935 tttaaacga 2943
|||||||||
Sbjct: 181 tttaaacga 189
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 359,899
Number of extensions: 6685
Number of successful extensions: 6685
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6685
Number of HSP's successfully gapped: 2
Length of query: 3397
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3379
Effective length of database: 8,109,745
Effective search space: 27402828355
Effective search space used: 27402828355
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)