BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03215 (UTR included)
(2074 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1618_C1 1053 0.0
>BF14_1618_C1
Length = 839
Score = 1053 bits (531), Expect = 0.0
Identities = 538/539 (99%), Gaps = 1/539 (0%)
Strand = Plus / Plus
Query: 342 gtctagccagtagccgccccagacaattatcagtttttagagtgctattgaaattgacag 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtctagccagtagccgccccagacaattatcagtttttagagtgctattgaaattgacag 60
Query: 402 tgcccttgtcaaaatatttctcattttaaaattatttgtatcgcaacaaaatcgtattta 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcccttgtcaaaatatttctcattttaaaattatttgtatcgcaacaaaatcgtattta 120
Query: 462 tctcttaaaagctgcaattaactatttatataacccaaaatgagtgacaataagaacgat 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctcttaaaagctgcaattaactatttatataacccaaaatgagtgacaataagaacgat 180
Query: 522 aataaacaaatacgcgtgtggtgtgatggctgttacgatatggtacattttggtcatgcc 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aataaacaaatacgcgtgtggtgtgatggctgttacgatatggtacattttggtcatgcc 240
Query: 582 aactcgttaaggcaagcaaagtccttaggagatgtgttgattgtgggagtgcacacggat 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aactcgttaaggcaagcaaagtccttaggagatgtgttgattgtgggagtgcacacggat 300
Query: 642 gaagaaatatccaaacataaaggtccacctgtgttcacacagcaggagagatacaaaatg 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaagaaatatccaaacataaaggtccacctgtgttcacacagcaggagagatacaaaatg 360
Query: 702 gttggtgcaatcaaatgggtcgaccatgtggtggagggtgcaccttatgtgacaacatta 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttggtgcaatcaaatgggtcgaccatgtggtggagggtgcaccttatgtgacaacatta 420
Query: 762 gaaacattagacaaataccagtgtgatttctgtgtgcatggagatgacataacagtaacg 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaaacattagacaaataccagtgtgatttctgtgtgcatggagatgacataacagtaacg 480
Query: 822 gcggatggaatcgatacataccatttagtaaaagaagccggcagatacaggagaggtga 880
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 481 gcggatggaatcgatacataccatttagtaaaagaagccggcagataca-gagaggtga 538
Score = 450 bits (227), Expect = e-126
Identities = 230/231 (99%)
Strand = Plus / Plus
Query: 872 gagaggtgacaaagaatattcagttgaactggaacattcatcaaatcttgggacggattc 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gagaggtgacaaagaatattcagttgaactggaacattcatcaaatcttgggacggattc 668
Query: 932 cacagcgaggtcaccatacaccggttgttcacagttcctgcctactacacagaaaattat 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 cacagcgaggtcaccatacaccggttgttcacagttcctgcctactacacagaaaattat 728
Query: 992 acaatttagcagtggtctttcaccaaagcccacggataaagtagtatatgtggctggtgc 1051
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 729 acaatttagcagtggtctttcaccaaagcccacagataaagtagtatatgtggctggtgc 788
Query: 1052 cttcgacctgttccatgtcggtcacctggacttcctggaggcggcgcacgc 1102
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 cttcgacctgttccatgtcggtcacctggacttcctggaggcggcgcacgc 839
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 313,870
Number of extensions: 7843
Number of successful extensions: 7843
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7843
Number of HSP's successfully gapped: 2
Length of query: 2074
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2057
Effective length of database: 8,119,229
Effective search space: 16701254053
Effective search space used: 16701254053
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)