BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03218 (UTR included)
(1237 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033B1A02 1566 0.0
>BF01033B1A02
Length = 828
Score = 1566 bits (790), Expect = 0.0
Identities = 821/831 (98%), Gaps = 4/831 (0%)
Strand = Plus / Plus
Query: 138 ttttttcaatagaactgtttgaaaaattcatgtcatatagatgcaatggctttgtaaata 197
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 ttttttcaatagaactgtttgaaaaattcatgtcatat----gcaatggctttgtaaata 57
Query: 198 aaagtgtgtctttaaaacaacataattcggaatttagtcttaatcaagagttcggaagaa 257
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 58 aaagtgtgtctttaaaacaacattattcggaatttagtcttaatcaagagttcggaagaa 117
Query: 258 atagttatgatattagctgaaacattgctgttttctttagccttggtcgatatttgtggg 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 atagttatgatattagctgaaacattgctgttttctttagccttggtcgatatttgtggg 177
Query: 318 atcttgtttgttttagtttattatatcattactttatccgacttagaatgtgattattta 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 atcttgtttgttttagtttattatatcattactttatccgacttagaatgtgattattta 237
Query: 378 aacgctcaggagtgttgtgacaatcttaactattggctactgccaaaatacatcgcacat 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 aacgctcaggagtgttgtgacaatcttaactattggctactgccaaaatacatcgcacat 297
Query: 438 tgttttgttacatttttattattaataaacgggcagattttgttattcctcttcaatctg 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tgttttgttacatttttattattaataaacgggcagattttgttattcctcttcaatctg 357
Query: 498 cctatgtttatttggttaacatttgagtacttcactgtacccagaggcaatagtggtgca 557
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 358 cctatgtttatttggttaacatttgaatacttcactgtacccagaggcaatagtggtgca 417
Query: 558 tacgatccggccgaaatatacaatagaggccaacttaaaaaacatttgagagatgtaatg 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tacgatccggccgaaatatacaatagaggccaacttaaaaaacatttgagagatgtaatg 477
Query: 618 atctacattatttattacctgctatttttcttcatatatgtttactgcttcatattggca 677
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 478 atctacattatttattacctgctatttttcttcatatatgtttactgctttatattggca 537
Query: 678 ctattaaaaggagaccctattaaccgaggcagtgatgatgatattgtaactgagatttaa 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ctattaaaaggagaccctattaaccgaggcagtgatgatgatattgtaactgagatttaa 597
Query: 738 caaagccagtatgtccggaaagtccccgaacgatatttatttggggacgcagggcgacag 797
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 598 caaagccagtatgtccggaaagtccccgagcgatatttatttggggacgcagggcgacag 657
Query: 798 tgaggaggagaatcttgaagctactgatgtttctacaagatgttttaaactacacctgga 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 tgaggaggagaatcttgaagctactgatgtttctacaagatgttttaaactacacctgga 717
Query: 858 tgaacatataaaggcttatattgagaagaaggcgatacttgacagaccagtagaagtttt 917
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 718 tgaacatataaaggcttatattgagaagaaggcgattcttgacagaccagtagaagtttt 777
Query: 918 aaagtgtaataataatttgctagaaagtgttattttgaactatataatagt 968
||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 aaaatgtaataataatttgctagaaagtgttattttgaactatataatagt 828
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 165,103
Number of extensions: 3236
Number of successful extensions: 3236
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3235
Number of HSP's successfully gapped: 1
Length of query: 1237
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1220
Effective length of database: 8,119,229
Effective search space: 9905459380
Effective search space used: 9905459380
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)