BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03220 (UTR included)
(2143 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01035X1D09 1300 0.0
>BF01035X1D09
Length = 680
Score = 1300 bits (656), Expect = 0.0
Identities = 673/680 (98%)
Strand = Plus / Plus
Query: 793 gtcagaccttcatggaattactaagacgactcgctataaagaatcagtttggtttccacc 852
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 gtcagaccttcatggaattactaagacgactcgcnntaaagaatcagtttggtttccacc 60
Query: 853 gagattctgtgcagcgtgtcgagacgatccgcctggctcctgctaaccagcaagttctag 912
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61 gagattctgtgcagcgtgtcgagacgatccgcctggctcctgctanncagcaagttctag 120
Query: 913 ccagtgtggtgacgtcacacgcgccgccggcctcgtacattaaacatgtctgctacacta 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccagtgtggtgacgtcacacgcgccgccggcctcgtacattaaacatgtctgctacacta 180
Query: 973 actttaccagattcggttatccttctccgatatacgtgaacgtagttcgcgatcccgtag 1032
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 181 actttaccagattcggttatccttctccgatatacgtgaacgtagttcgtgatcccgtag 240
Query: 1033 aacgcgtcatctcgtggtactactacgtgcgcgccccctggtactacgtggaaaggaaac 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacgcgtcatctcgtggtactactacgtgcgcgccccctggtactacgtggaaaggaaac 300
Query: 1093 aagccttccctgaccttccactaccggatccagcgtggttaaagaaggacttcgagacgt 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagccttccctgaccttccactaccggatccagcgtggttaaagaaggacttcgagacgt 360
Query: 1153 gcgtgttaagcggcgatcgcgagtgtcgttatttggagggcgagactcacgagggtattg 1212
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 361 gcgtgttaagcggcgatcgcgagtgtcgctatttggagggcgagactcacgagggtattg 420
Query: 1213 gagaccacaggagacagacgctgttcttctgcggacacgaaccacagtgcacgccattca 1272
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 421 gagaccacaggagacagacgctgttcttctgcggacacgaaccacagtgcacgccattta 480
Query: 1273 acagtgtggaggcgctacaacgagctaagcgagttgtcgaacagcagtacgctgtggttg 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acagtgtggaggcgctacaacgagctaagcgagttgtcgaacagcagtacgctgtggttg 540
Query: 1333 gagtgctggaagacctgaattcaacgctgctggccttcgagagatacatacccaggttct 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gagtgctggaagacctgaattcaacgctgctggccttcgagagatacatacccaggttct 600
Query: 1393 ttacgggcgcactcaaaatgtactgggaggagctgaacacattcaacagaataaatagga 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttacgggcgcactcaaaatgtactgggaggagctgaacacattcaacagaataaatagga 660
Query: 1453 accacttcaaactacccgtc 1472
||||||||||||||||||||
Sbjct: 661 accacttcaaactacccgtc 680
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 314,017
Number of extensions: 12805
Number of successful extensions: 12805
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12805
Number of HSP's successfully gapped: 1
Length of query: 2143
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2126
Effective length of database: 8,119,229
Effective search space: 17261480854
Effective search space used: 17261480854
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)