BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03222 (UTR included)
(1894 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3443_C1 2153 0.0
>BF14_3443_C1
Length = 1244
Score = 2153 bits (1086), Expect = 0.0
Identities = 1209/1247 (96%), Gaps = 6/1247 (0%)
Strand = Plus / Plus
Query: 100 gtgcggaggcacataacgaattattgtcactacaaaagaaactcagtttattgaaagaca 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgcggaggcacataacgaattattgtcactacaaaagaaactcagtttattgaaagaca 60
Query: 160 gcaacgaaactttggaaaataaatgcagagatttacagtctgaaattataaaactgagaa 219
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccacgaaactttggaaaataaatgcagagatttacagtctgaaattataaaactgagaa 120
Query: 220 atgacaatatgaatttagtagataatatcaaattaatagataaagaaagggacaaactag 279
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 121 atgacaatatgaatttattagataatatcaaattgatagataaagaaagggacaaactag 180
Query: 280 tcattgagttagatcagaaaactgaaaatataagtgtttatcttgtctttgaa-ttaagt 338
||||||||||||||||||||||||||||||||||||||| | | || |||| |
Sbjct: 181 tcattgagttagatcagaaaactgaaaatataagtgttt---tagaacagaaacttaatt 237
Query: 339 gtc--tcatatgagttaagtaaactcgaaaatgaattgagtgacgcaaagagaaaactta 396
| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 cacagtcatatgacttaggtaaactcgaaaatgaattgagtgacgcaaagagaaaactta 297
Query: 397 atatgaacaaagtaagcgaacacaaagtagtggactatgaatcacaaataactttcctta 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 atatgaacaaagtaagcgaacacaaagtagtggactatgaatcacaaataactttcctta 357
Query: 457 atggtgaaatattaaggctgacacagcagctggatacatcggtgatggaaaataaacatt 516
|||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 358 atggcgaaatattgaggctaacacagcagctggatacagcggtgatggaaaataaacatt 417
Query: 517 tacaaaatagtttagccgatgccaatggacatttgaaaataacgagaattgaactagaaa 576
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 418 tacaaaatagtttagccgatgctaatggacatttgaaaataacgagaattgaactagaaa 477
Query: 577 aatctaaaaaggacgtcgacgggctcaaacagcaattgcaacattacgtagctgaaatta 636
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 478 aatctaaaaaggacgtcgacggcctcaaacagcaattacaacattacgtagctgaaatta 537
Query: 637 gaagaattgaggagcttttatctcaaaaggaagccgaaagatcagatatgttagaacact 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gaagaattgaggagcttttatctcaaaaggaagccgaaagatcagatatgttagaacact 597
Query: 697 ttgctagtttatctgtcgaagctaacattttagaaaacacaaatcactcattggagagcg 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ttgctagtttatctgtcgaagctaacattttagaaaacacaaatcactcattggagagcg 657
Query: 757 agtccgcgtctaaatcaatgcaacttcagtcatatgttagtaaaattcaaaatttagaag 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 agtccgcgtctaaatcaatgcaacttcagtcatatgttagtaaaattcaaaatttagaag 717
Query: 817 aaaaacttgtggacaaagaacacattattgacagtcagtcagctagaatagcagctatga 876
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 agaaacttgtggacaaagaacacattattgacagtcagtcagctagaatagcagctatga 777
Query: 877 cctgcaagataagttcattagaaaatgaaataaaactgatgacagaagagaagaatatcc 936
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 cctgcaagattagttcattagaaaatgaaataaaactgatgacagaagagaagaatatct 837
Query: 937 tggagcaaaatgttagctgccttaaacaaatgtgcaacaatctacaaagcaacaagatgc 996
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 838 tggagcaaaatgttagctgccttaaacaaatgtgcaacaatctacaaagcaacaagatac 897
Query: 997 ctaaaagtgatgataattcagaaatcaagttatatgaaaatagaatacgaaatctgtcta 1056
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 898 ctaaaagtgacgataattcagaaattaagttatatgaaaatagaatacgaaatctgtcta 957
Query: 1057 gtgttaaaactcaattggaatctgagaaggaggatttaaaggagaagttgcggacaaccg 1116
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 958 gtgttaaaactcaattggaatttgagaagcaggatttaaaggagaagttgcggacaaccg 1017
Query: 1117 aaagattactatccaacacgagaagggagtgcatagagttgaaattagctttacaagatg 1176
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 aaagattactatcaaacacgagaagggagtgcatagagttgaaattagctttacaagatg 1077
Query: 1177 ctacgtcggaaacaaaatctcttcaagaacatgtcagcagacttaggacagcggatgacg 1236
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1078 ctacatcggaaacaaaatctcttcaagaacatgtcagcagacttaggacagcggatgacg 1137
Query: 1237 aacagaatgtattagccaccgccgagttgaatctcaacctgcctttaatgttggaagaaa 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1138 aacagaatgtattagccaccgccgagttgaatctcaacctgcctttaatgttggaagaaa 1197
Query: 1297 cgatacacgagctcagccatgaagacgagtacagtgatagatgtaat 1343
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1198 cgatacacgagctcagccatgaagacgagtacagtgatagatgtaat 1244
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 319,302
Number of extensions: 19599
Number of successful extensions: 19599
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19599
Number of HSP's successfully gapped: 2
Length of query: 1894
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1877
Effective length of database: 8,119,229
Effective search space: 15239792833
Effective search space used: 15239792833
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)