BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03225 (UTR included)
(1540 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012B2E02 809 0.0
BF01018A1B01 337 3e-92
>BF01012B2E02
Length = 653
Score = 809 bits (408), Expect = 0.0
Identities = 414/416 (99%)
Strand = Plus / Plus
Query: 330 gctggtatattgtatggaagtgttgtctgtctaaatttcgctttgttcgtgagcttattg 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gctggtatattgtatggaagtgttgtctgtctaaatttcgctttgttcgtgagcttattg 297
Query: 390 gggggatgtcggatacccctccagcatcagaaacacgacaacctaaagccagaaaatcta 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gggggatgtcggatacccctccagcatcagaaacacgacaacctaaagccagaaaatcta 357
Query: 450 gacgtgaataataatctttattagtattttataaattcaagcctatacaaaatgaatata 509
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 358 gacgtgaataataatctttattagtattttataaatccaagcctatacaaaatgaatata 417
Query: 510 cgttgcgctcgtccaagcgatcttatgaacatgcagcactgcaacttgttgtgtctgcca 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 cgttgcgctcgtccaagcgatcttatgaacatgcagcactgcaacttgttgtgtctgcca 477
Query: 570 gaaaactatcaaatgaaatattacttctaccatggattgtcctggcctcagcttagctat 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gaaaactatcaaatgaaatattacttctaccatggattgtcctggcctcagcttagctat 537
Query: 630 gttgctgaagatgagaagggacatattgttggctatgtattggcaaaaatggaagaagat 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gttgctgaagatgagaagggacatattgttggctatgtattggcaaaaatggaagaagat 597
Query: 690 ggtgaagataatcgccatgggcacataacatccttggctgtaaagaggtcccatag 745
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 598 ggtgaagataatcgccatgggcacataacatccttggctgttaagaggtcccatag 653
Score = 450 bits (227), Expect = e-126
Identities = 227/227 (100%)
Strand = Plus / Plus
Query: 27 ttgtagtttagtgttattagaagtacaatatgatttatttttgtatttaaacattacgat 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ttgtagtttagtgttattagaagtacaatatgatttatttttgtatttaaacattacgat 71
Query: 87 atacataagaaattatattaaaacatcgggtaaatgcattccactatcataacgtgttcc 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atacataagaaattatattaaaacatcgggtaaatgcattccactatcataacgtgttcc 131
Query: 147 ttagtcctttgtaattaatataacgtagataatatgaaggaagtgatattggctattata 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ttagtcctttgtaattaatataacgtagataatatgaaggaagtgatattggctattata 191
Query: 207 acatttttctgtagtattttcttagtattagcatttgtgttattttg 253
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 acatttttctgtagtattttcttagtattagcatttgtgttattttg 238
>BF01018A1B01
Length = 362
Score = 337 bits (170), Expect = 3e-92
Identities = 233/254 (91%), Gaps = 2/254 (0%)
Strand = Plus / Plus
Query: 372 ttgttcgtg-agcttat-tggggggatgtcggatacccctccagcatcagaaacacgaca 429
||||||||| ||||||| |||||||||||||||||||||||||||||||||||| | |||
Sbjct: 109 ttgttcgtgcagcttatctggggggatgtcggatacccctccagcatcagaaacgcaaca 168
Query: 430 acctaaagccagaaaatctagacgtgaataataatctttattagtattttataaattcaa 489
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 169 acctaaagccggaaaatctagacgtgaataataatctttattagtattttataaatccca 228
Query: 490 gcctatacaaaatgaatatacgttgcgctcgtccaagcgatcttatgaacatgcagcact 549
||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 229 acctatacaaaatgaatatacgttgcgctcgtccnntcnatcttatgaacatgcagcact 288
Query: 550 gcaacttgttgtgtctgccagaaaactatcaaatgaaatattacttctaccatggattgt 609
|| | |||||||||||||| |||||||||||||||||| |||||||| ||||||||
Sbjct: 289 gctanttgttgtgtctgccnnnngactatcaaatgaaatattgcttctaccttggattgt 348
Query: 610 cctggcctcagctt 623
||||||||||||||
Sbjct: 349 cctggcctcagctt 362
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 235,512
Number of extensions: 5009
Number of successful extensions: 5009
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5009
Number of HSP's successfully gapped: 3
Length of query: 1540
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1523
Effective length of database: 8,119,229
Effective search space: 12365585767
Effective search space used: 12365585767
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)