BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03226 (UTR included)
(2224 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016B1G06 1088 0.0
>BF01016B1G06
Length = 750
Score = 1088 bits (549), Expect = 0.0
Identities = 570/578 (98%)
Strand = Plus / Plus
Query: 480 cagggttaacgaacattcacaatgacgatcgtaactaatccagcctgcaccgacatctgc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 cagggttaacgaacattcacaatgacgatcgtaactaatccagcctgcaccgacatctgc 232
Query: 540 cttgaaagtcagatctctcaagcgtctacttctggcgtccaagcgatcagcactcatgag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 cttgaaagtcagatctctcaagcgtctacttctggcgtccaagcgatcagcactcatgag 292
Query: 600 tacgggcaatatggagagctgcgaatagatgagaacgcccggttatacgataacgagaag 659
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 293 tacgggcaatatggcgagctgcgaatagatgagaacgcccggttatacgataatgagaag 352
Query: 660 caaagcgacatagtatttgtcgctggaatcaatggagacacgttccggtttccgggtcat 719
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 353 caaagcgacatagtatttgtcgctggcatcaatggagacacgttccggtttccgggtcat 412
Query: 720 cggcgcgtccttgctgcaaccagtcctgttttcgctgcgttactttccacaaaagcggac 779
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 413 cgccgcgtccttgctgcaaccagtcctgtcttcgctgcgttactttccacaaaagcggac 472
Query: 780 gttattgtcgtagattatatcgacagacgaggcttcgaacagctccttcgttaccactat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gttattgtcgtagattatatcgacagacgaggcttcgaacagctccttcgttaccactat 532
Query: 840 tgcgaacccacacagttgacctctgtgtttactgccagagccactcttaatgccgcctat 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tgcgaacccacacagttgacctctgtgtttactgccagagccactcttaatgccgcctat 592
Query: 900 aaatttctgtgcccgcaacttgcagagcgctgtgcaaaacggctggatgaaatgttagac 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 aaatttctgtgcccgcaacttgcagagcgctgtgcaaaacggctggatgaaatgttagac 652
Query: 960 gctgaggtcgcgcttgagatattgcgtgatttaagatatttatgcgcgaggctacctgga 1019
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gctgnnntcgcgcttgagatattgcgtgatttaagatatttatgcgcgaggctacctgga 712
Query: 1020 gctgcttcggcgcctcctttaccagcgttggaaaatga 1057
||||||||||||||||||||||||||||||||||||||
Sbjct: 713 gctgcttcggcgcctcctttaccagcgttggaaaatga 750
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 256,813
Number of extensions: 5892
Number of successful extensions: 5892
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5892
Number of HSP's successfully gapped: 1
Length of query: 2224
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2207
Effective length of database: 8,119,229
Effective search space: 17919138403
Effective search space used: 17919138403
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)