BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03233 (UTR included)
(2212 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023A2A12 115 3e-25
BF01037B1H08 107 8e-23
BF01056B1D02 103 1e-21
BF01040A1G09 82 4e-15
BF01031B1E12 80 2e-14
BF01062A1A05 76 3e-13
>BF01023A2A12
Length = 723
Score = 115 bits (58), Expect = 3e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 2143 atcatcatcatcagcctatcggagcccactgctgagcaaaggcctcttctcacatggata 2202
||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |
Sbjct: 345 atcatcatcatcagcctatcggagctcactgctgagcaaaggcctcttatcacatggaga 286
Query: 2203 aggttagagc 2212
||||||||||
Sbjct: 285 aggttagagc 276
>BF01037B1H08
Length = 758
Score = 107 bits (54), Expect = 8e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 2143 atcatcatcatcagcctatcggagcccactgctgagcaaaggcctcttctcacatggata 2202
||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| | |
Sbjct: 349 atcatcaccatcagcctatcggagcccacagctgagcaaaggcctcttctcacatgtaga 290
Query: 2203 aggttagagc 2212
||||||||||
Sbjct: 289 aggttagagc 280
>BF01056B1D02
Length = 778
Score = 103 bits (52), Expect = 1e-21
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 2143 atcatcatcatcagcctatcggagcccactgctgagcaaaggcctcttctcacatg 2198
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 atcattatcatcagcctatcggagcccactgctgagcaaaggcctcttctcacatg 688
>BF01040A1G09
Length = 753
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 2143 atcatcatcatcagcctatcggagcccactgctgagcaaaggcctcttctcacatggata 2202
||||||||||||||||||||||| ||||||||||||| | |||||||||| |||||| |
Sbjct: 137 atcatcatcatcagcctatcggaagccactgctgagcataagcctcttctcgcatggaga 78
Query: 2203 aggtt 2207
|||||
Sbjct: 77 aggtt 73
>BF01031B1E12
Length = 730
Score = 79.8 bits (40), Expect = 2e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 2145 catcatcatcagcctatcggagcccactgctgagcaaaggcctcttctcacatggataag 2204
||||||||| |||||||||||||||||||||||||||| || ||||||||| ||| |||
Sbjct: 216 catcatcataagcctatcggagcccactgctgagcaaa-tccccttctcacacggagaag 158
Query: 2205 gttagagc 2212
||||||||
Sbjct: 157 gttagagc 150
>BF01062A1A05
Length = 777
Score = 75.8 bits (38), Expect = 3e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 2163 ggagcccactgctgagcaaaggcctcttctcacatggataaggttagagc 2212
||||||||||||| |||||||||||||||||||| ||| |||||||||||
Sbjct: 586 ggagcccactgctaagcaaaggcctcttctcacaaggagaaggttagagc 537
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 324,194
Number of extensions: 7204
Number of successful extensions: 7204
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 7203
Number of HSP's successfully gapped: 6
Length of query: 2212
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2195
Effective length of database: 8,119,229
Effective search space: 17821707655
Effective search space used: 17821707655
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)