BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03246 (UTR included)
(2500 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A2F03 1501 0.0
BF14_755_C1 1033 0.0
BF01005B1A10 779 0.0
BF01047B2H05 90 2e-17
>BF01056A2F03
Length = 801
Score = 1501 bits (757), Expect = 0.0
Identities = 790/801 (98%)
Strand = Plus / Plus
Query: 878 ttcatccaatcgttcaggaggtgagggtcctaaaactcctcaatctcctgctagttcagt 937
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcatcccatcgttcaggaggtgagggtcctaaaactcctcaatctcctgctagttcagt 60
Query: 938 aaaatctgctccaggttcaccaactagtagatcccaaccaatatcacccgactcagcatc 997
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 61 aaaatctgctccaggttcaccaactagtagatcccaaccgatatcacccgactcagcatc 120
Query: 998 ccaaatcacaagtccatctagatatcgtgattcttggttgccttcctacaataatcgtag 1057
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 121 ccaaatcacaagtccatctagatatcgtgattcttggtcgccttcctacaataatcgtag 180
Query: 1058 agcatctcctcattcctcccctactgcttctcctgttaagaaaaatgactggagtcctaa 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcatctcctcattcctcccctactgcttctcctgttaagaaaaatgactggagtcctaa 240
Query: 1118 agagaattggcgacggcatacaaaggcagaacagaaaatggttcccactccaagaaatag 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agagaattggcgacggcatacaaaggcagaacagaaaatggttcccactccaagaaatag 300
Query: 1178 aagtaggtcggattcaagtcgatccagtcaaagttcatcatacaataagagaactaacac 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagtaggtcggattcaagtcgatccagtcaaagttcatcatacaataagagaactaacac 360
Query: 1238 taaagatcccgccaccgaagaaatatctgatggggaaatggaatcggatcaagaggacaa 1297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taaagatcccgccaccgaagaaatatctgatggggaaatggaatcggatcaagaggacaa 420
Query: 1298 taagtccaggcgcaagtctccgggcagcgagaaacatgaaaaagagaataatatcagtca 1357
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 421 taagtccagacgcaagtctccgagcagcgagaaacatgaaaaagagaataatatcagtca 480
Query: 1358 tgaagatttaagtgacgtgtcagacgaggactccgacacacaagatgacaataaagacat 1417
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgaagatttaagcgatgtgtcagacgaggactccgacacacaagatgacaataaagacat 540
Query: 1418 aaagaccaaaccaaaccccccatccactgataagaaaaatgaaatttttaatggtaacga 1477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaagaccaaaccaaaccccccatccactgataagaaaaatgaaatttttaatggtaacga 600
Query: 1478 tggtgaaatttcacagctgtcttctatttcggagggtggaaaaaatgctaaaaaaacaga 1537
|||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||
Sbjct: 601 tggtgaaatttcacagctgtcttctaatttggagggtggaaagaatgctaaaaaaacaga 660
Query: 1538 aaaggtgtcacaagaaaaaacaaacaatacagaagacggcgaggaacagttggactttga 1597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaaggtgtcacaagaaaaaacaaacaatacagaagacggcgaggaacagttggactttga 720
Query: 1598 agctgaagaaggagagtgtattgaaacgacaaagacaaaagatcaatctaacggggatgt 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agctgaagaaggagagtgtattgaaacgacaaagacaaaagatcaatctaacggggatgt 780
Query: 1658 tgatagtcagagcaatgagaa 1678
|||||||||||||||||||||
Sbjct: 781 tgatagtcagagcaatgagaa 801
>BF14_755_C1
Length = 851
Score = 1033 bits (521), Expect = 0.0
Identities = 530/532 (99%), Gaps = 2/532 (0%)
Strand = Plus / Plus
Query: 1 tacaaaatgaaaagtgttataaagtgcttccaattttggcgtcgaggcgtcatcattaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tacaaaatgaaaagtgttataaagtgcttccaattttggcgtcgaggcgtcatcattaag 379
Query: 61 gtaaggctggatgtgtctacaatatccatcagaacgtagttcttactaaaaagttcacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtaaggctggatgtgtctacaatatccatcagaacgtagttcttactaaaaagttcacct 439
Query: 121 tattctatcggaataaaatttctgagtaacgaaattaaaagagactattggtagggatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tattctatcggaataaaatttctgagtaacgaaattaaaagagactattggtagggatag 499
Query: 181 aactttttaaagcccagatgtttataaggtggcagcaatataatattttacacttcgtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aactttttaaagcccagatgtttataaggtggcagcaatataatattttacacttcgtat 559
Query: 241 tcattatgaattgttatattcttaaactgatatgtacgtttttgttataagcaggtataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcattatgaattgttatattcttaaactgatatgtacgtttttgttataagcaggtataa 619
Query: 301 taattattacatttatttattattttgttttgccctaaaggtaaggctaactatttatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 taattattacatttatttattattttgttttgccctaaaggtaaggctaactatttatat 679
Query: 361 attatatatttaa--atatatacatatatatatttatatttaagttcaatatattttgtc 418
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 attatatatttaaatatatatacatatatatatttatatttaagttcaatatattttgtc 739
Query: 419 atattaataaatatagagtgcttattgggagtctctacctagtcaagcattgaattaaga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atattaataaatatagagtgcttattgggagtctctacctagtcaagcattgaattaaga 799
Query: 479 atgctatatacgatttacagaaatggattctgaagattctcgtgatgccact 530
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 atgctatatacgatttacagaaatggattctgaagattctcgtgatgccact 851
>BF01005B1A10
Length = 690
Score = 779 bits (393), Expect = 0.0
Identities = 396/397 (99%)
Strand = Plus / Plus
Query: 1492 agctgtcttctatttcggagggtggaaaaaatgctaaaaaaacagaaaaggtgtcacaag 1551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 agctgtcttctatttcggagggtggaaaaaatgctaaaaaaacagaaaaggtgtcacaag 353
Query: 1552 aaaaaacaaacaatacagaagacggcgaggaacagttggactttgaagctgaagaaggag 1611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aaaaaacaaacaatacagaagacggcgaggaacagttggactttgaagctgaagaaggag 413
Query: 1612 agtgtattgaaacgacaaagacaaaagatcaatctaacggggatgttgatagtcagagca 1671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 agtgtattgaaacgacaaagacaaaagatcaatctaacggggatgttgatagtcagagca 473
Query: 1672 atgagaaagaggaagtgaaagcgggtcgtagatcgcgaggttcttctctagaagagggcg 1731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 atgagaaagaggaagtgaaagcgggtcgtagatcgcgaggttcttctctagaagagggcg 533
Query: 1732 aggtgtctgacgaggcagagcgtcggcccgaggagagtgaaccgcgaccggtctgcagat 1791
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 534 aggtgtctgacgaggcagagcgtcgacccgaggagagtgaaccgcgaccggtctgcagat 593
Query: 1792 tcttctcacggggcgcctgcacctggggagtcagctgcaggttcctgcatcccggtgtaa 1851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tcttctcacggggcgcctgcacctggggagtcagctgcaggttcctgcatcccggtgtaa 653
Query: 1852 cggacaaaggtaactacaacatgtttgatgtggtccg 1888
|||||||||||||||||||||||||||||||||||||
Sbjct: 654 cggacaaaggtaactacaacatgtttgatgtggtccg 690
Score = 535 bits (270), Expect = e-151
Identities = 285/291 (97%)
Strand = Plus / Plus
Query: 1127 gcgacggcatacaaaggcagaacagaaaatggttcccactccaagaaatagaagtaggtc 1186
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 gcgacggcatacaaaggcagaacagaaaatnnntcccactccaagaaatagaagtaggtc 60
Query: 1187 ggattcaagtcgatccagtcaaagttcatcatacaataagagaactaacactaaagatcc 1246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggattcaagtcgatccagtcaaagttcatcatacaataagagaactaacactaaagatcc 120
Query: 1247 cgccaccgaagaaatatctgatggggaaatggaatcggatcaagaggacaataagtccag 1306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgccaccgaagaaatatctgatggggaaatggaatcggatcaagaggacaataagtccag 180
Query: 1307 gcgcaagtctccgggcagcgagaaacatgaaaaagagaataatatcagtcatgaagattt 1366
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acgcaagtctccgagcagcgagaaacatgaaaaagagaataatatcagtcatgaagattt 240
Query: 1367 aagtgacgtgtcagacgaggactccgacacacaagatgacaataaagacat 1417
|||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagtgatgtgtcagacgaggactccgacacacaagatgacaataaagacat 291
>BF01047B2H05
Length = 718
Score = 89.7 bits (45), Expect = 2e-17
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 1932 ccgccagagtcggcctgggaaaggggactgcggactgccaaagaa 1976
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgccagagtcggcctgggaaaggggactgcggactgccaaagaa 45
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 315,821
Number of extensions: 8002
Number of successful extensions: 8002
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 7999
Number of HSP's successfully gapped: 5
Length of query: 2500
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2483
Effective length of database: 8,119,229
Effective search space: 20160045607
Effective search space used: 20160045607
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)