BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03254 (UTR included)
(3130 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023A2A12 127 1e-28
BF01037B1H08 113 2e-24
BF01056B1D02 107 1e-22
BF01040A1G09 94 2e-18
BF01031B1E12 94 2e-18
BF01062A1A05 90 3e-17
BF01052B1H02 90 3e-17
BF01010B2F09 74 1e-12
>BF01023A2A12
Length = 723
Score = 127 bits (64), Expect = 1e-28
Identities = 82/88 (93%)
Strand = Plus / Plus
Query: 2940 agcgtggtgattaatgaactaaccttctccataagagaagaggcctttgctcagcagtgg 2999
|||||||||||||||| |||||||||||||| || ||||||||||||||||||||||
Sbjct: 261 agcgtggtgattaatgctctaaccttctccatgtgataagaggcctttgctcagcagtga 320
Query: 3000 gctccgataggctgatgatgatgatgat 3027
||||||||||||||||||||||||||||
Sbjct: 321 gctccgataggctgatgatgatgatgat 348
>BF01037B1H08
Length = 758
Score = 113 bits (57), Expect = 2e-24
Identities = 84/93 (90%)
Strand = Plus / Plus
Query: 2932 cttgaacaagcgtggtgattaatgaactaaccttctccataagagaagaggcctttgctc 2991
||||| ||||||||||| |||||| |||||||||| ||| ||||||||||||||||||
Sbjct: 257 cttgagcaagcgtggtgcttaatgctctaaccttctacatgtgagaagaggcctttgctc 316
Query: 2992 agcagtgggctccgataggctgatgatgatgat 3024
||| ||||||||||||||||||||| |||||||
Sbjct: 317 agctgtgggctccgataggctgatggtgatgat 349
>BF01056B1D02
Length = 778
Score = 107 bits (54), Expect = 1e-22
Identities = 86/96 (89%), Gaps = 3/96 (3%)
Strand = Plus / Plus
Query: 2932 cttgaacaagcgtggtgattaatgaactaaccttctccataagagaagaggcctttgctc 2991
||||| ||||||||||| |||||| ||||||||| || ||||||||||||||||||
Sbjct: 654 cttgagcaagcgtggtggttaatgctctaaccttc---atgtgagaagaggcctttgctc 710
Query: 2992 agcagtgggctccgataggctgatgatgatgatgat 3027
||||||||||||||||||||||||||| ||||||||
Sbjct: 711 agcagtgggctccgataggctgatgataatgatgat 746
>BF01040A1G09
Length = 753
Score = 93.7 bits (47), Expect = 2e-18
Identities = 83/95 (87%)
Strand = Plus / Plus
Query: 2932 cttgaacaagcgtggtgattaatgaactaaccttctccataagagaagaggcctttgctc 2991
||||| ||||||||| |||||||| |||||||||||| |||||||||| | |||||
Sbjct: 45 cttgagcaagcgtggcgattaatgcttaaaccttctccatgcgagaagaggcttatgctc 104
Query: 2992 agcagtgggctccgataggctgatgatgatgatga 3026
|||||||| |||||||||||||||||||||||||
Sbjct: 105 agcagtggcttccgataggctgatgatgatgatga 139
>BF01031B1E12
Length = 730
Score = 93.7 bits (47), Expect = 2e-18
Identities = 81/91 (89%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 2932 cttgaacaagcgtggtgattaatgaactaaccttctccataagagaagaggcctttgctc 2991
||||| |||||||||||||||||| |||||||||||| | |||||| || |||||||
Sbjct: 127 cttgagcaagcgtggtgattaatgctctaaccttctccgtgtgagaagggga-tttgctc 185
Query: 2992 agcagtgggctccgataggctgatgatgatg 3022
||||||||||||||||||||| |||||||||
Sbjct: 186 agcagtgggctccgataggcttatgatgatg 216
>BF01062A1A05
Length = 777
Score = 89.7 bits (45), Expect = 3e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 2932 cttgaacaagcgtggtgattaatgaactaaccttctccataagagaagaggcctttgctc 2991
||||| |||||||||||||||||| |||||||||||| | |||||||||||||||||
Sbjct: 514 cttgagcaagcgtggtgattaatgctctaaccttctccttgtgagaagaggcctttgctt 573
Query: 2992 agcagtgggctcc 3004
|||||||||||||
Sbjct: 574 agcagtgggctcc 586
>BF01052B1H02
Length = 790
Score = 89.7 bits (45), Expect = 3e-17
Identities = 87/101 (86%)
Strand = Plus / Minus
Query: 2932 cttgaacaagcgtggtgattaatgaactaaccttctccataagagaagaggcctttgctc 2991
||||| ||||||||||| |||||| ||||| |||||||| ||||| |||| |||||||
Sbjct: 358 cttgagcaagcgtggtgcttaatgctctaactttctccatgggagaaaaggcgtttgctc 299
Query: 2992 agcagtgggctccgataggctgatgatgatgatgatgatga 3032
| |||||||||| ||| |||| |||||| ||||||||||||
Sbjct: 298 aacagtgggctctgatgggctaatgatggtgatgatgatga 258
>BF01010B2F09
Length = 764
Score = 73.8 bits (37), Expect = 1e-12
Identities = 75/87 (86%), Gaps = 3/87 (3%)
Strand = Plus / Minus
Query: 2940 agcgtggtgattaatgaactaaccttctccataagagaagaggcctttgctcagcagtgg 2999
|||||||||||||||| |||||||||||||| ||||||| |||| |||||| | ||
Sbjct: 343 agcgtggtgattaatgctctaaccttctccatgtgagaagacgcct---ctcagcggcgg 287
Query: 3000 gctccgataggctgatgatgatgatga 3026
||||||| |||||| ||||||||||||
Sbjct: 286 gctccgacaggctggtgatgatgatga 260
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 284,434
Number of extensions: 6562
Number of successful extensions: 6562
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 6556
Number of HSP's successfully gapped: 8
Length of query: 3130
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3112
Effective length of database: 8,109,745
Effective search space: 25237526440
Effective search space used: 25237526440
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)