BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03265 (UTR included)
(1936 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058A2F11 357 4e-98
>BF01058A2F11
Length = 879
Score = 357 bits (180), Expect = 4e-98
Identities = 231/248 (93%), Gaps = 1/248 (0%)
Strand = Plus / Minus
Query: 1689 tattaatgaatcaaacatatatgtatatctattgtttttaaattgtcaatattgagaaag 1748
|||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 879 tattaatgtatcaaacaaatatgtatatctattgtttttaaatgtnaaatattgagaaag 820
Query: 1749 cttcgcacattagaagcatttaaagagaaatgaaacgataagttgttttgaatttgaata 1808
|||||||||||||||| |||||||||||||||||| |||||||||||||| |||||
Sbjct: 819 tttcgcacattagaagcgcttaaagagaaatgaaacgttaagttgttttgaannngaata 760
Query: 1809 tcactctgtagtaaacaaaacaacaagaaactagtttttctatgaaggagataatgctaa 1868
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 tcactctgtagtaaacaaaacaacaagaaactagtttttctatgaaggagataatgctat 700
Query: 1869 taacatgtagcatcaataacttacatgtcattcgaaatatataagtgtgaagaaggtaca 1928
|||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 caacatgta-catcaataagttacatgtcattcgaaatatataagtgtgaagaaggtaca 641
Query: 1929 ttaagttt 1936
||||||||
Sbjct: 640 ttaagttt 633
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,362
Number of extensions: 5341
Number of successful extensions: 5341
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5339
Number of HSP's successfully gapped: 1
Length of query: 1936
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1919
Effective length of database: 8,119,229
Effective search space: 15580800451
Effective search space used: 15580800451
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)