BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03273 (UTR included)
(1606 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020B1G01 1487 0.0
BF01061A1C11 886 0.0
>BF01020B1G01
Length = 769
Score = 1487 bits (750), Expect = 0.0
Identities = 756/758 (99%)
Strand = Plus / Plus
Query: 234 aacgacggtcgtacgggatcgcgacacggaacactcgggacacacgggacacggggccgc 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 aacgacggtcgtacgggatcgcgacacggaacactcgggacacacgggacacggggccgc 71
Query: 294 atgcgatactgttgtacgatgatatccacagtttagtttgtattgagcagtgttcgtgta 353
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atgcgatactgtagtacgatgatatccacagtttagtttgtattgagcagtgttcgtgta 131
Query: 354 gagtgactctatgattgtatgaggggtgtttgaagtctcggtggatctagttaccaaaca 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gagtgactctatgattgtatgaggggtgtttgaagtctcggtggatctagttaccaaaca 191
Query: 414 ccagcgggcacctgatgaggtaaaggctcttgaaaagttaagaatccttgagagtagtga 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ccagcgggcacctgatgaggtaaaggctcttgaaaagttaagaatccttgagagtagtga 251
Query: 474 cttgtcggtagtaaagtgtactaacagatgtacaccctttcacaactcgactaccaaacg 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cttgtcggtagtaaagtgtactaacagatgtacaccctttcacaactcgactaccaaacg 311
Query: 534 tcgatgaactctgccgctggtgctatgtgcgatcgagctggttatggtagcaccatgagc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tcgatgaactctgccgctggtgctatgtgcgatcgagctggttatggtagcaccatgagc 371
Query: 594 cacttccccatgggcccaatgtcggccatgggagccatcggcacaatgggagcgatctcg 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cacttccccatgggcccaatgtcggccatgggagccatcggcacaatgggagcgatctcg 431
Query: 654 gccatgaacggccaatcacaccagaagaaatcccaggaggaacacatcaagcgacccatg 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gccatgaacggccaatcacaccagaagaaatcccaggaggaacacatcaagcgacccatg 491
Query: 714 aacgcgttcatggtgtggtccagattacaaaggaggaaaattgcccaggacaatccaaaa 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aacgcgttcatggtgtggtccagattacaaaggaggaaaattgcccaggacaatccaaaa 551
Query: 774 atgcataactcggagatctcaaagagattaggcgctgaatggaagttgctctcagaagac 833
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 552 atgcataactcggagatctcaaagagattaggcgctgagtggaagttgctctcagaagac 611
Query: 834 gagaagagacccttcattgatgaggcgaagcgtttgagagccatgcacatgaaggaacac 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gagaagagacccttcattgatgaggcgaagcgtttgagagccatgcacatgaaggaacac 671
Query: 894 ccagactataagtacagaccgcggaggaagcccaagactttgaggaaggaaggctatccc 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ccagactataagtacagaccgcggaggaagcccaagactttgaggaaggaaggctatccc 731
Query: 954 tactccatcccctatcccagtgtaccgatggacgcctt 991
||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tactccatcccctatcccagtgtaccgatggacgcctt 769
>BF01061A1C11
Length = 828
Score = 886 bits (447), Expect = 0.0
Identities = 453/455 (99%)
Strand = Plus / Plus
Query: 545 tgccgctggtgctatgtgcgatcgagctggttatggtagcaccatgagccacttccccat 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tgccgctggtgctatgtgcgatcgagctggttatggtagcaccatgagccacttccccat 252
Query: 605 gggcccaatgtcggccatgggagccatcggcacaatgggagcgatctcggccatgaacgg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gggcccaatgtcggccatgggagccatcggcacaatgggagcgatctcggccatgaacgg 312
Query: 665 ccaatcacaccagaagaaatcccaggaggaacacatcaagcgacccatgaacgcgttcat 724
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ccaatcacatcagaagaaatcccaggaggaacacatcaagcgacccatgaacgcgttcat 372
Query: 725 ggtgtggtccagattacaaaggaggaaaattgcccaggacaatccaaaaatgcataactc 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ggtgtggtccagattacaaaggaggaaaattgcccaggacaatccaaaaatgcataactc 432
Query: 785 ggagatctcaaagagattaggcgctgaatggaagttgctctcagaagacgagaagagacc 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ggagatctcaaagagattaggcgctgaatggaagttgctctcagaagacgagaagagacc 492
Query: 845 cttcattgatgaggcgaagcgtttgagagccatgcacatgaaggaacacccagactataa 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cttcattgatgaggcgaagcgtttgagagccatgcacatgaaggaacacccagactataa 552
Query: 905 gtacagaccgcggaggaagcccaagactttgaggaaggaaggctatccctactccatccc 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gtacagaccgcggaggaagcccaagactttgaggaaggaaggctatccctactccatccc 612
Query: 965 ctatcccagtgtaccgatggacgccttgagagccg 999
|||||||||||||||||||||||||||||| ||||
Sbjct: 613 ctatcccagtgtaccgatggacgccttgagggccg 647
Score = 373 bits (188), Expect = e-103
Identities = 191/192 (99%)
Strand = Plus / Plus
Query: 241 gtcgtacgggatcgcgacacggaacactcgggacacacgggacacggggccgcatgcgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcgtacgggatcgcgacacggaacactcgggacacacgggacacggggccgcatgcgat 60
Query: 301 actgttgtacgatgatatccacagtttagtttgtattgagcagtgttcgtgtagagtgac 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actgtagtacgatgatatccacagtttagtttgtattgagcagtgttcgtgtagagtgac 120
Query: 361 tctatgattgtatgaggggtgtttgaagtctcggtggatctagttaccaaacaccagcgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctatgattgtatgaggggtgtttgaagtctcggtggatctagttaccaaacaccagcgg 180
Query: 421 gcacctgatgag 432
||||||||||||
Sbjct: 181 gcacctgatgag 192
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 128,694
Number of extensions: 2249
Number of successful extensions: 2249
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2249
Number of HSP's successfully gapped: 3
Length of query: 1606
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1589
Effective length of database: 8,119,229
Effective search space: 12901454881
Effective search space used: 12901454881
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)