BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03275 (UTR included)
(2098 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 100 2e-20
BF14_1695_C1 94 1e-18
BF01061B1E05 88 7e-17
BF01049B2H03 88 7e-17
BF14_3184_C1 70 2e-11
>BF14_729_C3
Length = 2041
Score = 99.6 bits (50), Expect = 2e-20
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 469 tagtaaatccgaataacactagtttcatttaaatgaatactcgcgaaaatcttagatctc 528
||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1668 tagtatatccgaataatactagcttcatttaaatgaatactcgcgaaaatcttagatctc 1727
Query: 529 at 530
||
Sbjct: 1728 at 1729
>BF14_1695_C1
Length = 1407
Score = 93.7 bits (47), Expect = 1e-18
Identities = 47/47 (100%)
Strand = Plus / Minus
Query: 486 actagtttcatttaaatgaatactcgcgaaaatcttagatctcatta 532
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1066 actagtttcatttaaatgaatactcgcgaaaatcttagatctcatta 1020
>BF01061B1E05
Length = 745
Score = 87.7 bits (44), Expect = 7e-17
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 486 actagtttcatttaaatgaatactcgcgaaaatcttagatctca 529
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 actagtttcatttaaatgaatactcgcgaaaatcttagatctca 54
>BF01049B2H03
Length = 832
Score = 87.7 bits (44), Expect = 7e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 474 aatccgaataacactagtttcatttaaatgaatactcgcgaaaatcttagatctcattat 533
|||||||| || | ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 296 aatccgaaaaatattagtttcatttaaatgaatactcgctaaaatcttagatctcattat 355
>BF14_3184_C1
Length = 1256
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 488 tagtttcatttaaatgaatactcgcgaaaatcttagatc 526
||||||||||||||||| |||||||||||||||||||||
Sbjct: 52 tagtttcatttaaatgagtactcgcgaaaatcttagatc 14
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 257,082
Number of extensions: 5632
Number of successful extensions: 5632
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 5632
Number of HSP's successfully gapped: 5
Length of query: 2098
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2081
Effective length of database: 8,119,229
Effective search space: 16896115549
Effective search space used: 16896115549
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)