BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03278 (UTR included)
(1444 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 161 4e-39
BF14_335_C4 151 4e-36
BF01049B1F01 145 2e-34
BF14_335_C5 145 2e-34
BF01043B1E03 139 1e-32
BF01016B1E06 127 5e-29
BF01019A1H08 123 8e-28
BF01021A2B11 98 5e-20
BF01014B2F02 98 5e-20
BF01044B2F11 96 2e-19
BF01017A1F03 88 5e-17
BF01016A2B02 86 2e-16
>BF14_335_C2
Length = 1827
Score = 161 bits (81), Expect = 4e-39
Identities = 175/202 (86%), Gaps = 7/202 (3%)
Strand = Plus / Plus
Query: 743 ccgtgcgggcgccgggtccgtcg--ttgcagggagaggagcttcatcagtgcctgggact 800
||||||||| |||||||||| || |||||||||||||||||||| |||||||||||| |
Sbjct: 840 ccgtgcgggtgccgggtccgccgcgttgcagggagaggagcttcaacagtgcctgggatt 899
Query: 801 tgcgacccaggtgtaggtctgaggggcccctatctaacgcgcgt--taaacgctcacctc 858
|||||| ||||||||||| | | | ||||||||||||| ||||| ||||||||||||
Sbjct: 900 tgcgacacaggtgtaggt-ttaagagcccctatctaactcgcgtacataacgctcacctc 958
Query: 859 cactgtccaagctcctctccctactcaccaaatttgaaaagaccctactagggctgcctt 918
||| |||||||||||||| || || ||||||||||||| || |||||||| |||| |||
Sbjct: 959 caccgtccaagctcctct--ctcctaaccaaatttgaaacgaacctactagagctgtctt 1016
Query: 919 cgaagtacgttccaaggatgaa 940
|||||||||||| ||| |||||
Sbjct: 1017 cgaagtacgttcgaagaatgaa 1038
>BF14_335_C4
Length = 1491
Score = 151 bits (76), Expect = 4e-36
Identities = 131/148 (88%), Gaps = 1/148 (0%)
Strand = Plus / Minus
Query: 772 ggagaggagcttcatcagtgcctgggacttgcgacccaggtgtaggtctgaggggcccct 831
|||||||||||||| |||||||||||||||||||||||||||||||| | ||||||| |
Sbjct: 1302 ggagaggagcttcaacagtgcctgggacttgcgacccaggtgtaggtttaaggggccttt 1243
Query: 832 atctaacgcgcgttaaacgctcacctccactgtccaagctcctctcccta-ctcaccaaa 890
|||| |||||| ||||||||||||||| ||| |||||||||||||| ||| || ||||||
Sbjct: 1242 atcttacgcgcattaaacgctcacctcaactttccaagctcctctctctacctaaccaaa 1183
Query: 891 tttgaaaagaccctactagggctgcctt 918
| |||| || ||| |||||||||||||
Sbjct: 1182 tatgaatcgatcctgctagggctgcctt 1155
>BF01049B1F01
Length = 840
Score = 145 bits (73), Expect = 2e-34
Identities = 110/121 (90%), Gaps = 1/121 (0%)
Strand = Plus / Plus
Query: 762 gtcgttgcagggagaggagcttcatcagtgcctgggacttgcgacccaggtgtaggtctg 821
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 585 gtcgttgcagggagaggagcttcaacagtgcctgggacttgcgacccaggtgtaggtgta 644
Query: 822 aggggcccctatctaacgcgcgttaaacgctcacctccactgtccaagctcctctcccta 881
||||| ||||||||||| | |||||||| | |||||| || ||||||||||||||| |||
Sbjct: 645 agggg-ccctatctaactcccgttaaacacccacctctaccgtccaagctcctctctcta 703
Query: 882 c 882
|
Sbjct: 704 c 704
>BF14_335_C5
Length = 1597
Score = 145 bits (73), Expect = 2e-34
Identities = 122/140 (87%)
Strand = Plus / Minus
Query: 743 ccgtgcgggcgccgggtccgtcgttgcagggagaggagcttcatcagtgcctgggacttg 802
||||||||| ||||||| | || ||||| |||||||||||||| ||||||||||||||||
Sbjct: 1579 ccgtgcgggtgccgggtgcatctttgcacggagaggagcttcaacagtgcctgggacttg 1520
Query: 803 cgacccaggtgtaggtctgaggggcccctatctaacgcgcgttaaacgctcacctccact 862
||| |||||||| | ||| |||||| |||||||||| ||||||||||||||||||
Sbjct: 1519 cgannnnngtgtaggtttaaggcgcccctgtctaacgcgcattaaacgctcacctccacc 1460
Query: 863 gtccaagctcctctccctac 882
||||||||||||||| ||||
Sbjct: 1459 gtccaagctcctctctctac 1440
>BF01043B1E03
Length = 830
Score = 139 bits (70), Expect = 1e-32
Identities = 163/192 (84%), Gaps = 4/192 (2%)
Strand = Plus / Minus
Query: 755 cgggtccgtcgttgcagggagaggagcttcatcagtgcctgggacttgcgacccaggtgt 814
||||||| ||||||| |||||||||| | || ||||| |||||||||| |||||||| |
Sbjct: 463 cgggtccatcgttgctgggagaggaggtccaatagtgcttgggacttgcaacccaggtat 404
Query: 815 aggtctgaggggcccctatctaacgcgcgttaaacgctcacctccactgtccaagctcct 874
|||| | | |||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 403 aggtttaaagggcccctatctaacgcgcgttaagtgctcacctccactgtccaaggtcct 344
Query: 875 ctcccta-ctcaccaaatttgaaaagaccctactagggctgccttcgaagtacgttccaa 933
||| ||| || ||||||||||||| | | ||||| ||||||| | ||||||||||||
Sbjct: 343 ctctctacctaaccaaatttgaaacaaac---ctaggcctgcctttgcagtacgttccaa 287
Query: 934 ggatgaattgat 945
| |||| |||||
Sbjct: 286 gaatgatttgat 275
>BF01016B1E06
Length = 606
Score = 127 bits (64), Expect = 5e-29
Identities = 120/135 (88%), Gaps = 4/135 (2%)
Strand = Plus / Plus
Query: 765 gttgcagggagaggagcttcatcagtgcctgggacttgcgacccaggtgtaggtctgagg 824
||||||| ||||||||||||| ||||||| |||| | ||||||||||||||||| | |||
Sbjct: 193 gttgcagagagaggagcttcaacagtgccggggagtagcgacccaggtgtaggtttaagg 252
Query: 825 ggcccctatctaacgcgcgttaaacgctcacctccactgtccaagctcctctcccta-ct 883
|| |||||||||| |||||||||||||||||||||| |||||| |||||||| ||| ||
Sbjct: 253 gg-ccctatctaa--cgcgttaaacgctcacctccaccgtccaatctcctctctctacct 309
Query: 884 caccaaatttgaaaa 898
||||||||||||||
Sbjct: 310 aaccaaatttgaaaa 324
>BF01019A1H08
Length = 504
Score = 123 bits (62), Expect = 8e-28
Identities = 98/109 (89%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 743 ccgtgcgggcgccgggtccgtcg--ttgcagggagaggagcttcatcagtgcctgggact 800
||||||||| ||||||||| ||| |||||||||||||||||||| |||||||||||| |
Sbjct: 396 ccgtgcgggtgccgggtccatcgcgttgcagggagaggagcttcaacagtgcctgggagt 455
Query: 801 tgcgacccaggtgtaggtctgaggggcccctatctaacgcgcgttaaac 849
|||||||||||||||||| | |||||| ||||||||| ||||||||||
Sbjct: 456 tgcgacccaggtgtaggtttaaggggctcctatctaagacgcgttaaac 504
>BF01021A2B11
Length = 729
Score = 97.6 bits (49), Expect = 5e-20
Identities = 79/89 (88%)
Strand = Plus / Minus
Query: 789 gtgcctgggacttgcgacccaggtgtaggtctgaggggcccctatctaacgcgcgttaaa 848
|||||||||||| | |||||||||||||| ||| ||||| ||||||| |||||||||
Sbjct: 462 gtgcctgggactgggcacccaggtgtaggttgaaggcgccccgatctaacacgcgttaaa 403
Query: 849 cgctcacctccactgtccaagctcctctc 877
||||||||||||| |||||||||||||||
Sbjct: 402 cgctcacctccaccgtccaagctcctctc 374
>BF01014B2F02
Length = 623
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 743 ccgtgcgggcgccgggtccgtcgttgcagggagaggagcttcatcagtgcctgggacttg 802
||||||||| ||||||||| |||||||||||||||||||||| ||| |||| |||||||
Sbjct: 551 ccgtgcgggtgccgggtccagcgttgcagggagaggagcttcagcagcgcctaggacttg 610
Query: 803 cgacccaggtgta 815
|||||||||||||
Sbjct: 611 cgacccaggtgta 623
>BF01044B2F11
Length = 728
Score = 95.6 bits (48), Expect = 2e-19
Identities = 99/115 (86%), Gaps = 2/115 (1%)
Strand = Plus / Minus
Query: 763 tcgttgcagggagaggagcttcatcagtgcctgggacttgcgacccaggtgtaggtctga 822
|||||||||||||||||||||| ||| |||||||||||| | ||||||||||| | |
Sbjct: 709 tcgttgcagggagaggagcttcgacagcacctgggacttgcaattcaggtgtaggtttaa 650
Query: 823 ggggcccctatctaacgcgcgttaaacgctcacctccactgtccaagctcctctc 877
| |||||||||||| | | |||||||||||||||||||||||||||||||||
Sbjct: 649 gtggcccctatcta--ctgtgataaacgctcacctccactgtccaagctcctctc 597
>BF01017A1F03
Length = 782
Score = 87.7 bits (44), Expect = 5e-17
Identities = 127/150 (84%), Gaps = 6/150 (4%)
Strand = Plus / Minus
Query: 799 cttgcgacccaggtgtaggtctgaggggcccctatctaacgcgcgttaaacgctcacctc 858
|||||||||||||||||||| | |||| ||||||||| ||||||||||||||||||||
Sbjct: 287 cttgcgacccaggtgtaggt-ttaggg--acctatctaatgcgcgttaaacgctcacctc 231
Query: 859 cactgtccaagctcctctcccta-ctcaccaaatttgaaaagaccctactagggct--gc 915
||| || ||||||||||| ||| || ||||| || |||| | |||||||||| ||
Sbjct: 230 caccgtggaagctcctctctctatctaaccaacttagaaactaatgtactagggctgcgc 171
Query: 916 cttcgaagtacgttccaaggatgaattgat 945
||| ||||||||||||||| ||||||||||
Sbjct: 170 cttggaagtacgttccaagaatgaattgat 141
>BF01016A2B02
Length = 780
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 764 cgttgcagggagaggagcttcatcagtgcctgggacttgcgacccaggtgtaggtctgag 823
||||| |||||||||||||||| |||||||||||| ||||||| |||||||||| | ||
Sbjct: 224 cgttgaagggagaggagcttcaacagtgcctgggaattgcgactcaggtgtaggcttaag 283
Query: 824 gggcccctatctaac 838
||||||||||||||
Sbjct: 284 aggcccctatctaac 298
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 193,408
Number of extensions: 4155
Number of successful extensions: 4155
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 4146
Number of HSP's successfully gapped: 12
Length of query: 1444
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1427
Effective length of database: 8,119,229
Effective search space: 11586139783
Effective search space used: 11586139783
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)