BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03289 (UTR included)
(2029 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1019_C2 2030 0.0
BF14_1019_C1 1043 0.0
>BF14_1019_C2
Length = 1048
Score = 2030 bits (1024), Expect = 0.0
Identities = 1042/1048 (99%)
Strand = Plus / Plus
Query: 337 ttttgcattacttaaataatttgcgtcgctgttgtttaagatatattatcctttagactt 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttgcattacttaaataatttgcgtcgctgttgtttaagatatattatcctttagactt 60
Query: 397 agtagacaaagttaaactgtgatacaaagacttaattaattatataagtgttctttgtta 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtagacaaagttaaactgtgatacaaagacttaattaattatataagtgttctttgtta 120
Query: 457 tttattgattttatatttatttaagtgaattagtttatattacaatgggtagaaagaaga 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttattgattttatatttatttaagtgaattagtttatattacaatgggtagaaagaaga 180
Query: 517 agaaggcgtcgaaaccttggtgctggtattgcaacagagaatttgacgatgagaagatat 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaaggcgtcgaaaccttggtgctggtattgcaacagagaatttgacgatgagaagatat 240
Query: 577 taatacagcatcaaaaagcaaagcatttcaaatgtcatatatgtcacaagaaattgtaca 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taatacagcatcaaaaagcaaagcatttcaaatgtcatatatgtcacaagaaattgtaca 300
Query: 637 cgggtccagggctgtcaatacactgcatgcaggttcacaaagaagccatagacaaagttc 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgggtccagggctgtcaatacactgcatgcaggttcacaaagaagccatagacaaagttc 360
Query: 697 caaattctttaccaaataggtcaaatatagaaatagaaatatatggtatggaaggtattc 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caaattctttaccaaataggtcaaatatagaaatagaaatatatggtatggaaggtattc 420
Query: 757 ccccagaagatgtgaaggagcatgagaaacaaaagacaggtggggggaaaggttcagaga 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccccagaagatgtgaaggagcatgagaaacaaaagacaggtggggggaaaggttcagaga 480
Query: 817 gtgatgatgatgagccggcggctaagagaaaagctactcccgctttgttgggtccggggc 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtgatgatgatgagccggcggctaagagaaaagctactcccgctttgttgggtccggggc 540
Query: 877 catcacaagtgaatcccggtattctcccgactccgatgggtcagatgcctcccgggatgt 936
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 541 catcacaagtgaatcccggtatcctcccgactccgatgggtcagatgcctcctgggatgt 600
Query: 937 atcctgcacatatgcaaatgaaccatatgatgccacacttcatgcattcacctcgaatga 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atcctgcacatatgcaaatgaaccatatgatgccacacttcatgcattcacctcgaatga 660
Query: 997 tgatgcctggcatgcggcccttgttcccagcggccagtgtccagacgtccacaccaaaca 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgatgcctggcatgcggcccttgttcccagcggccagtgtccagacgtccacaccaaaca 720
Query: 1057 aacctaccttccctgcatatagcaatgcaacgataagcgcaccgcccacgacatcgaatt 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aacctaccttccctgcatatagcaatgcaacgataagcgcaccgcccacgacatcgaatt 780
Query: 1117 ctgatcccaaagagaacggtgacgtcagacctcccgcggccaacacctgtccactggtga 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ctgatcccaaagagaacggtgacgtcagacctcccgcggccaacacctgtccactggtga 840
Query: 1177 cgtccaccggcgccggctccaagatcattcacccgccggaagacgtgtcgttagaggaaa 1236
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 841 cgtccaccggcgccggctccaagatcattcacccgccggaagacgtatcgttagaggaaa 900
Query: 1237 taagagcgaggaaccccaagtacaggcccaaaccaaaacccgacactcacatccagagcg 1296
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 901 taagagcgaggaaccccaagtacaggcccaaaaccaaacccgacactcacatccagagcg 960
Query: 1297 cacccgctatgatcacacccaccagccaagcagaggtggcggcccacatgtccgcggcgg 1356
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 961 cacccgctatgatcacacccaccagccaagcggaggtggcggcccacatgtccgcggcgg 1020
Query: 1357 tggcggcggcgcggcagcaggccatgcg 1384
||||||||||||||||||||||||||||
Sbjct: 1021 tggcggcggcgcggcagcaggccatgcg 1048
>BF14_1019_C1
Length = 1371
Score = 1043 bits (526), Expect = 0.0
Identities = 526/526 (100%)
Strand = Plus / Plus
Query: 272 agtttgtcgtttcgatcgtcgcgttgactggttgctgaacattttatagttcgtgttgtc 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtttgtcgtttcgatcgtcgcgttgactggttgctgaacattttatagttcgtgttgtc 60
Query: 332 cgccattttgcattacttaaataatttgcgtcgctgttgtttaagatatattatccttta 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgccattttgcattacttaaataatttgcgtcgctgttgtttaagatatattatccttta 120
Query: 392 gacttagtagacaaagttaaactgtgatacaaagacttaattaattatataagtgttctt 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gacttagtagacaaagttaaactgtgatacaaagacttaattaattatataagtgttctt 180
Query: 452 tgttatttattgattttatatttatttaagtgaattagtttatattacaatgggtagaaa 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgttatttattgattttatatttatttaagtgaattagtttatattacaatgggtagaaa 240
Query: 512 gaagaagaaggcgtcgaaaccttggtgctggtattgcaacagagaatttgacgatgagaa 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaagaagaaggcgtcgaaaccttggtgctggtattgcaacagagaatttgacgatgagaa 300
Query: 572 gatattaatacagcatcaaaaagcaaagcatttcaaatgtcatatatgtcacaagaaatt 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatattaatacagcatcaaaaagcaaagcatttcaaatgtcatatatgtcacaagaaatt 360
Query: 632 gtacacgggtccagggctgtcaatacactgcatgcaggttcacaaagaagccatagacaa 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtacacgggtccagggctgtcaatacactgcatgcaggttcacaaagaagccatagacaa 420
Query: 692 agttccaaattctttaccaaataggtcaaatatagaaatagaaatatatggtatggaagg 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agttccaaattctttaccaaataggtcaaatatagaaatagaaatatatggtatggaagg 480
Query: 752 tattcccccagaagatgtgaaggagcatgagaaacaaaagacaggt 797
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tattcccccagaagatgtgaaggagcatgagaaacaaaagacaggt 526
Score = 464 bits (234), Expect = e-130
Identities = 240/242 (99%)
Strand = Plus / Plus
Query: 863 gttgggtccggggccatcacaagtgaatcccggtattctcccgactccgatgggtcagat 922
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 1130 gttgggtccggggccatcacaagtgaatcctggtatcctcccgactccgatgggtcagat 1189
Query: 923 gcctcccgggatgtatcctgcacatatgcaaatgaaccatatgatgccacacttcatgca 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1190 gcctcccgggatgtatcctgcacatatgcaaatgaaccatatgatgccacacttcatgca 1249
Query: 983 ttcacctcgaatgatgatgcctggcatgcggcccttgttcccagcggccagtgtccagac 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1250 ttcacctcgaatgatgatgcctggcatgcggcccttgttcccagcggccagtgtccagac 1309
Query: 1043 gtccacaccaaacaaacctaccttccctgcatatagcaatgcaacgataagcgcaccgcc 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1310 gtccacaccaaacaaacctaccttccctgcatatagcaatgcaacgataagcgcaccgcc 1369
Query: 1103 ca 1104
||
Sbjct: 1370 ca 1371
Score = 139 bits (70), Expect = 2e-32
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 794 aggtggggggaaaggttcagagagtgatgatgatgagccggcggctaagagaaaagctac 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 aggtggggggaaaggttcagagagtgatgatgatgagccggcggctaagagaaaagctac 777
Query: 854 tcccgctttg 863
||||||||||
Sbjct: 778 tcccgctttg 787
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 221,503
Number of extensions: 5089
Number of successful extensions: 5089
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5089
Number of HSP's successfully gapped: 4
Length of query: 2029
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2012
Effective length of database: 8,119,229
Effective search space: 16335888748
Effective search space used: 16335888748
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)