BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03301 (UTR included)
(1200 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2981_C1 1227 0.0
BF01019A1H08 86 1e-16
BF01044B1A07 74 6e-13
BF14_335_C2 72 2e-12
>BF14_2981_C1
Length = 800
Score = 1227 bits (619), Expect = 0.0
Identities = 661/675 (97%)
Strand = Plus / Plus
Query: 438 agctatacaatatatggtttaatttgttcgtgcagtgtgtatacagttcatgcatacagt 497
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2 agctatacaatatatggtttaatttgttcgtgcagtgtgtatacagtacatgcatacagt 61
Query: 498 gtgatgtcgctattagaagatgtttttctacgagacgaagccaacgaagcccaagagtta 557
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 62 gtgatgtcgctattagaagatgtttttctacgagacgaagccgacgaagcccaagaatta 121
Query: 558 gagagagtaatagagggcgaggaatatgaagacagaccccgggataggtcagatagtgat 617
|| ||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||
Sbjct: 122 gaaagagtaatagagggcgacgaatatgaagacagaccccggaatagatcagatagtgat 181
Query: 618 aatgatagtgaacgatcagacgaagctgaggaagataaaagaaaagttgatccagcgtca 677
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 182 aatgatagtgaacgatcagacgaagctgaggaagataaaagaaaagttgatccagcatca 241
Query: 678 actaaaataagacgaataattaaaaatccaagatttgttttgaatcctgctagattaacc 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 actaaaataagacgaataattaaaaatccaagatttgttttgaatcctgctagattaacc 301
Query: 738 ggaccgagaggaatacatgttataccagaacatttcaaagattttaaattcaaaggtaaa 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggaccgagaggaatacatgttataccagaacatttcaaagattttaaattcaaaggtaaa 361
Query: 798 ggtcatgagaaagaagatctagatttaattcttaagaaattagaacattgggcctataga 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ggtcatgagaaagaagatctagatttaattcttaagaaattagaacattgggcctataga 421
Query: 858 ttgtatcctaaatttcaatttgaggattgtttgaagaaaattgaaacgctcggaaagaag 917
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 422 ttgtatcctaaatttcaatttgaggattgtttgaagaaaattgaaacactcggaaagaag 481
Query: 918 agacctgttatggttaatttacataaaataagatcagaccaatttactacggaggagccg 977
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 482 agacctgttatggtaaatttacataaaataagatcggaccaatttactacggaggagccg 541
Query: 978 atagttcaggaagattccactgatgatgatgagcctcaggatgagtttgacaagttgttg 1037
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 atagttcagaaagattccactgatgatgatgagcctcaggatgagtttgacaagttgttg 601
Query: 1038 cagcagcaaatagatttagctagagctgctgaggcaaagacagatgaaacacatagtccc 1097
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 602 cagcagcaaatagatttagctagagctgctgagacaaagacagatgaaacacacagtccc 661
Query: 1098 gttaggagtaacaag 1112
|||||||||||||||
Sbjct: 662 gttaggagtaacaag 676
>BF01019A1H08
Length = 504
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1134 gagattaaacttctcagcattgcatggattcaccgtgcgggtgccgggtccaacgcgttg 1193
||||| |||| ||| |||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 364 gagatgaaacctcttagcattcaatggattcaccgtgcgggtgccgggtccatcgcgttg 423
Query: 1194 cagggag 1200
|||||||
Sbjct: 424 cagggag 430
>BF01044B1A07
Length = 806
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 1140 aaacttctcagcattgcatggattcaccgtgcgggtgccgggtccaacgcgttgcaggga 1199
|||||||||||| || |||||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 433 aaacttctcagcgttcaatggattcaccgtgcgggtggcgggtccatcgcgtggcaggga 492
Query: 1200 g 1200
|
Sbjct: 493 g 493
>BF14_335_C2
Length = 1827
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 1157 atggattcaccgtgcgggtgccgggtccaacgcgttgcagggag 1200
|||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 831 atggattcaccgtgcgggtgccgggtccgccgcgttgcagggag 874
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 174,595
Number of extensions: 4174
Number of successful extensions: 4174
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 4174
Number of HSP's successfully gapped: 4
Length of query: 1200
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1183
Effective length of database: 8,119,229
Effective search space: 9605047907
Effective search space used: 9605047907
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)