BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03302 (UTR included)
(3199 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041B1C11 692 0.0
BF01040A1B04 430 e-120
>BF01041B1C11
Length = 830
Score = 692 bits (349), Expect = 0.0
Identities = 349/349 (100%)
Strand = Plus / Plus
Query: 2090 ggtcccggccgccttacctcccggatacgcgtacttctatcagccaccgcctacgtccta 2149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ggtcccggccgccttacctcccggatacgcgtacttctatcagccaccgcctacgtccta 410
Query: 2150 tcagtacggagtttatccaccttacggtggtggctcaagcgtgggcggcgtgggaggcgt 2209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tcagtacggagtttatccaccttacggtggtggctcaagcgtgggcggcgtgggaggcgt 470
Query: 2210 aggtggcgtgggcggcgtaggcggagtgggcggcgtgggcggtgtgggcgtgtcaggagg 2269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aggtggcgtgggcggcgtaggcggagtgggcggcgtgggcggtgtgggcgtgtcaggagg 530
Query: 2270 tggaaaagtatccgcttactcacaacaacaacaaccgccctacgacggccaggacacgta 2329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tggaaaagtatccgcttactcacaacaacaacaaccgccctacgacggccaggacacgta 590
Query: 2330 taaaccaggcgggccttacacgggtagtgcgaataagacgggcggaggcgccaatgatct 2389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 taaaccaggcgggccttacacgggtagtgcgaataagacgggcggaggcgccaatgatct 650
Query: 2390 caccaacacaatgtatgccaagactcatgtagctctcaacaaggtcaat 2438
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 caccaacacaatgtatgccaagactcatgtagctctcaacaaggtcaat 699
Score = 595 bits (300), Expect = e-169
Identities = 312/316 (98%)
Strand = Plus / Plus
Query: 1703 cagcttaacgagcacctccacgacacagacgtccacggcgaaggttaccacaaccacagt 1762
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 36 cagcctaacgagcacctccacgacacaaacgtccacggcgaaggttaccacaaccacagt 95
Query: 1763 gagcaacgcggcgagtacgggtgcgtcgtcagccacgagcgcagcgggcggcggagcggg 1822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 gagcaacgcggcgagtacgggtgcgtcgtcagccacgagcgcagcgggcggcggagcggg 155
Query: 1823 agcgggcgcgggcgcggcgtacgcgggcggagcgttgtacggcggagcgtacgcttacga 1882
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 agcgggcgcgagcgcggcgtacgcgggcggagcgttgtacggcggagcgtacgcttacga 215
Query: 1883 tgaacaaatcatgagaggaacgctaccgcaccatatgggcggatactacgaggtcggcta 1942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 tgaacaaatcatgagaggaacgctaccgcaccatatgggcggatactacgaggtcggcta 275
Query: 1943 cggagctcgcgaaggcacgttcggtctgggagcgggagagagattcggtagaacggacgc 2002
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 276 cggagctcgcgaaggcacgttcggtctgggagcgggagagagattcggcagaacggacgc 335
Query: 2003 cgcctcaccacaacag 2018
||||||||||||||||
Sbjct: 336 cgcctcaccacaacag 351
Score = 206 bits (104), Expect = 2e-52
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 2486 agttacgagaaggctggttttcatagcggcaccccgccaccgttcggcgctgggtcacac 2545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 agttacgagaaggctggttttcatagcggcaccccgccaccgttcggcgctgggtcacac 759
Query: 2546 ctgtacataccggcccctccgcaccaccatccccaccaccacgc 2589
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 ctgtacataccggcccctccgcaccaccatccccaccaccacgc 803
>BF01040A1B04
Length = 762
Score = 430 bits (217), Expect = e-120
Identities = 217/217 (100%)
Strand = Plus / Plus
Query: 1130 gataccatcgtcggcggtggagatgccaggtggtactgagacatcgagcaatatgttcat 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gataccatcgtcggcggtggagatgccaggtggtactgagacatcgagcaatatgttcat 605
Query: 1190 cgacgtacagtttggagccctggaacccgacgccctacacgagcctccgccccccgtgca 1249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 cgacgtacagtttggagccctggaacccgacgccctacacgagcctccgccccccgtgca 665
Query: 1250 gggggcgccgcctcccaccaccacgcaatcacctacaaccagcatacagactaacaaaca 1309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gggggcgccgcctcccaccaccacgcaatcacctacaaccagcatacagactaacaaaca 725
Query: 1310 ggtcacgtcacaagctgacagccagcccgtaccaagc 1346
|||||||||||||||||||||||||||||||||||||
Sbjct: 726 ggtcacgtcacaagctgacagccagcccgtaccaagc 762
Score = 426 bits (215), Expect = e-119
Identities = 215/215 (100%)
Strand = Plus / Plus
Query: 916 gtggtaacattgattcgttccccaccacagaggattgggacaatgaggaatggtcgggct 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 gtggtaacattgattcgttccccaccacagaggattgggacaatgaggaatggtcgggct 142
Query: 976 ctctatcggatactaaggtgtttactcccagctccaacgcacttccggcggaagccgagc 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ctctatcggatactaaggtgtttactcccagctccaacgcacttccggcggaagccgagc 202
Query: 1036 cgccggctgttacggaggattgggagtctggagaggcgaacggccgcgaacacataccga 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cgccggctgttacggaggattgggagtctggagaggcgaacggccgcgaacacataccga 262
Query: 1096 cctacacataccacaacacacaccaacacataccg 1130
|||||||||||||||||||||||||||||||||||
Sbjct: 263 cctacacataccacaacacacaccaacacataccg 297
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 333,266
Number of extensions: 8335
Number of successful extensions: 8335
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8329
Number of HSP's successfully gapped: 5
Length of query: 3199
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3181
Effective length of database: 8,109,745
Effective search space: 25797098845
Effective search space used: 25797098845
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)