BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03318 (UTR included)
(3733 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021B1F09 559 e-158
>BF01021B1F09
Length = 792
Score = 559 bits (282), Expect = e-158
Identities = 282/282 (100%)
Strand = Plus / Plus
Query: 2289 cagggcgtggacgagggcggagtcagcaaggagttcttccaactggtcgtggaacagatc 2348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 cagggcgtggacgagggcggagtcagcaaggagttcttccaactggtcgtggaacagatc 70
Query: 2349 ttcaaccccgactacggcatgttcacacacaggcaggactcgcatactgtctggttcaac 2408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 ttcaaccccgactacggcatgttcacacacaggcaggactcgcatactgtctggttcaac 130
Query: 2409 cctacgtcgttcgagacggaggcccagttcacgttaatcggtatcgtgctggggctagcc 2468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 cctacgtcgttcgagacggaggcccagttcacgttaatcggtatcgtgctggggctagcc 190
Query: 2469 atatataataatataatattagcggtcaacttccccatggtggtgtacaggaaactcatg 2528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 atatataataatataatattagcggtcaacttccccatggtggtgtacaggaaactcatg 250
Query: 2529 ggaaagaaaggttccttcgaagatctcgctgattggaattct 2570
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ggaaagaaaggttccttcgaagatctcgctgattggaattct 292
Score = 319 bits (161), Expect = 2e-86
Identities = 167/169 (98%)
Strand = Plus / Plus
Query: 2571 actttatacaacggtttaaaagacatgctggactacaccggaagtgatttagaggaggtg 2630
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 398 actttatacaacggtttaaaagacatgctggactacaccggaagtgatttagaggaagtg 457
Query: 2631 tactaccagacgttcaggatatgctacaccgatgtgttcggcaacaatatattccatgat 2690
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 458 tactaccagacgttcaggatatgctacaccgacgtgttcggcaacaatatattccatgat 517
Query: 2691 ctcaaagaaaacggcgacaatattttcgtcacgcaggacaataaacagg 2739
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ctcaaagaaaacggcgacaatattttcgtcacgcaggacaataaacagg 566
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 417,801
Number of extensions: 8801
Number of successful extensions: 8801
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8801
Number of HSP's successfully gapped: 2
Length of query: 3733
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3715
Effective length of database: 8,109,745
Effective search space: 30127702675
Effective search space used: 30127702675
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)