BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03322 (UTR included)
(1756 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043B1F09 1166 0.0
BF01018A2H04 76 2e-13
>BF01043B1F09
Length = 775
Score = 1166 bits (588), Expect = 0.0
Identities = 600/604 (99%)
Strand = Plus / Plus
Query: 757 gtttagacccagcaggtccatgttttcgttccttgcctcctcgcgatcgcttccattctg 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gtttagacccagcaggtccatgttttcgttccttgcctcctcgcgatcgcttccattctg 231
Query: 817 ccggcgctctcaaagtagatgccatccacactaacatcgatggcttcggtataccggacg 876
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 232 ccggcgctctcaaagtagatgccatccacactaacatcgatggtttcggtataccggacg 291
Query: 877 caattggtcatgtcgatttttatgttaacggcggtgaatttcaaccttctatggtctcag 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 caattggtcatgtcgatttttatgttaacggcggtgaatttcaaccttctatggtctcag 351
Query: 937 attatctgctaccttgctttcaactgtgcagtcatgtacgttcagctatctactggctca 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 attatctgctaccttgctttcaactgtgcagtcatgtacgttcagctatctactggctca 411
Query: 997 tagcgagttacgagcgacatcagttcgtcggtgtcaaatgtaattctgtcgctgaagcgc 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tagcgagttacgagcgacatcagttcgtcggtgtcaaatgtaattctgtcgctgaagcgc 471
Query: 1057 gacacggaaaatgttactatagagacgttgacacaaatgttttgggaccaaagacgaatt 1116
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 472 gacacggaaaatgttactatagaggcgttgacacaaatgttttgggaccaaagacgaatt 531
Query: 1117 tcaaccgtccagggatatattatctccctacgacagaaaacaaacccttttacatgggca 1176
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tcaaccgtccggggatatattatctccctacgacagaaaacaaacccttttacatgggca 591
Query: 1177 aagaaggtctcaagaagagaaaatacgatgttaatcattatttactacaagtttccccag 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 aagaaggtctcaagaagagaaaatacgatgttaatcattatttactacaagtttccccag 651
Query: 1237 agaaggatatgattatttgaataaaattatgagaggaagcaataattgattaagttcttc 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 agaaggatatgattatttgaataaaattatgagaggaagcaataattgattaagttcttc 711
Query: 1297 cttacttaagtacatataatgcggtgattgcgtgttaagacttttaataagtaaactatt 1356
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 712 cttacttaagtacatataatgcggtgattgcgtgttaagactttcaataagtaaactatt 771
Query: 1357 aata 1360
||||
Sbjct: 772 aata 775
>BF01018A2H04
Length = 679
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 104 attttcggatttactacgcttttttaattatttcaactacattctgccgacgttttagtt 163
||||||||||||||||||| ||||| |||| || | || ||| ||||||| |||| |||
Sbjct: 351 attttcggatttactacgcgttttttattagtttatcttcatactgccgaggtttcggtt 292
Query: 164 actttgcagcgaccgtgatcacgggc 189
||||||||| |||||||||||||||
Sbjct: 291 actttgcagtaaccgtgatcacgggc 266
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 246,148
Number of extensions: 5962
Number of successful extensions: 5962
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5962
Number of HSP's successfully gapped: 2
Length of query: 1756
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1739
Effective length of database: 8,119,229
Effective search space: 14119339231
Effective search space used: 14119339231
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)