BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03337 (UTR included)
(1336 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_433_C1 831 0.0
>BF14_433_C1
Length = 2144
Score = 831 bits (419), Expect = 0.0
Identities = 419/419 (100%)
Strand = Plus / Plus
Query: 395 ggcggatcaactaacagaggaacagatcgccgagttcaaggaggcgttttcactgttcga 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 ggcggatcaactaacagaggaacagatcgccgagttcaaggaggcgttttcactgttcga 154
Query: 455 taaagatggggacggcaccatcaccaccaaggagctggggaccgtgatgaggtcgctggg 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 taaagatggggacggcaccatcaccaccaaggagctggggaccgtgatgaggtcgctggg 214
Query: 515 acagaaccccacggaggccgagctccaggacatgatcaacgaggttgacgctgatggtaa 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 acagaaccccacggaggccgagctccaggacatgatcaacgaggttgacgctgatggtaa 274
Query: 575 cggtacgatagacttccccgaattcctgacgatgatggcgcgcaagatgaaggacacgga 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 cggtacgatagacttccccgaattcctgacgatgatggcgcgcaagatgaaggacacgga 334
Query: 635 cagcgaggaggagatccgcgaggcgttccgcgtgttcgacaaggacggcaacggattcat 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 cagcgaggaggagatccgcgaggcgttccgcgtgttcgacaaggacggcaacggattcat 394
Query: 695 atccgccgcggagctgcgtcacgtgatgaccaacctcggagagaagctcaccgacgagga 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 atccgccgcggagctgcgtcacgtgatgaccaacctcggagagaagctcaccgacgagga 454
Query: 755 ggtggacgagatgatccgcgaggccgacatcgacggcgacggccaggtcaattacgagg 813
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ggtggacgagatgatccgcgaggccgacatcgacggcgacggccaggtcaattacgagg 513
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 143,261
Number of extensions: 6688
Number of successful extensions: 6688
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6686
Number of HSP's successfully gapped: 1
Length of query: 1336
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1319
Effective length of database: 8,119,229
Effective search space: 10709263051
Effective search space used: 10709263051
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)