BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03338 (UTR included)
(1708 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 80 1e-14
BF01019A1H08 76 2e-13
BF01044B1A07 72 3e-12
BF01055B2A04 68 5e-11
BF01037A2H12 68 5e-11
BF01031B2E06 68 5e-11
>BF14_335_C2
Length = 1827
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 1368 gagctcgtaatacttgttgaccttggtggcatggtctttgggaatgttggtttcccaagg 1427
|||||| |||||||||||||||||| ||||||||| |||||| |||||||| | ||||||
Sbjct: 1162 gagctcataatacttgttgaccttgatggcatggtttttggggatgttggtcttccaagg 1221
Query: 1428 aacc 1431
||||
Sbjct: 1222 aacc 1225
>BF01019A1H08
Length = 504
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 1234 agatcaaacctctcagtgttcaatggattcaccgcgcgggtgccgggtccatcgcgtt 1291
|||| |||||||| || |||||||||||||||| |||||||||||||||||||||||
Sbjct: 365 agatgaaacctcttagcattcaatggattcaccgtgcgggtgccgggtccatcgcgtt 422
>BF01044B1A07
Length = 806
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 1239 aaacctctcagtgttcaatggattcaccgcgcgggtgccgggtccatcgcgt 1290
|||| |||||| ||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 433 aaacttctcagcgttcaatggattcaccgtgcgggtggcgggtccatcgcgt 484
>BF01055B2A04
Length = 830
Score = 67.9 bits (34), Expect = 5e-11
Identities = 72/84 (85%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 1346 tattcttagtgagttcgttagagagctcgtaatacttgttgaccttggtggcatggtctt 1405
||||| ||||||||||||||| ||||| | ||||| ||||||| ||||||| ||||||
Sbjct: 448 tattcctagtgagttcgttagtgagcttg---tacttattgacctcggtggcacggtctt 504
Query: 1406 tgggaatgttggtttcccaaggaa 1429
|||| |||||||||| ||| ||||
Sbjct: 505 tggggatgttggttttccagggaa 528
>BF01037A2H12
Length = 773
Score = 67.9 bits (34), Expect = 5e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 1290 tttggctgttatacctctcgctcctacttctaccgcgaacaaattcacaa 1339
||||||| ||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 715 tttggcttttatacctctcgctcctacttttacctcgtacaaattcacaa 666
>BF01031B2E06
Length = 707
Score = 67.9 bits (34), Expect = 5e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 1372 tcgtaatacttgttgaccttggtggcatggtctttgggaatgttggtttc 1421
||||||||||| |||| |||| |||||||||||||||| |||||||||||
Sbjct: 485 tcgtaatacttattgatcttgatggcatggtctttggggatgttggtttc 436
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 213,346
Number of extensions: 4832
Number of successful extensions: 4832
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 4832
Number of HSP's successfully gapped: 6
Length of query: 1708
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1691
Effective length of database: 8,119,229
Effective search space: 13729616239
Effective search space used: 13729616239
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)