BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03340 (UTR included)
(1162 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3065_C1 579 e-165
>BF14_3065_C1
Length = 838
Score = 579 bits (292), Expect = e-165
Identities = 292/292 (100%)
Strand = Plus / Plus
Query: 373 caaacttaaatattaatataaaatacgactacaaaacagtcgacggtttctggacggtga 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caaacttaaatattaatataaaatacgactacaaaacagtcgacggtttctggacggtga 503
Query: 433 cagcacacaaggatgaatataaaatggacagagcacagttcaagttcaccaacctgttca 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cagcacacaaggatgaatataaaatggacagagcacagttcaagttcaccaacctgttca 563
Query: 493 acggaaacaaggagctcgctgacacaacactcaaattcctaaacgaaaattggagcatta 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acggaaacaaggagctcgctgacacaacactcaaattcctaaacgaaaattggagcatta 623
Query: 553 taatgcaagaaatagcgccgcccgccatggatcaggttatagagagctgtctggcggaag 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 taatgcaagaaatagcgccgcccgccatggatcaggttatagagagctgtctggcggaag 683
Query: 613 tgaagaagttctactccgtggtgcccgcggaattgctgctggccaattaatg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgaagaagttctactccgtggtgcccgcggaattgctgctggccaattaatg 735
Score = 575 bits (290), Expect = e-164
Identities = 302/306 (98%)
Strand = Plus / Plus
Query: 67 cgtcgttcattaaggcgtgctcagcctccgatcccaacctgaaccaatgtatcgaggacg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 cgtcgttcattaaggcgtgctcagcctccgatcccaacctgaaccaatgtatcgaggacg 143
Query: 127 tcataacatccgcggggcccaagttcgctcggggcatccctgagctgggcatcaagcctc 186
|||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||
Sbjct: 144 tcataacatccgcggggccccagttcgctcggggcatccctgagctgggaatcaaacctc 203
Query: 187 tggatcctgtagagctgggcaaggtggtcgtcgacaaccccgcactcaagcttaccttcg 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tggatcctgtagagctgggcaaggtggtcgtcgacaaccccgcactcaagcttaccttcg 263
Query: 247 aagacaccgtcgtcactggactggctggattcaagattaatactttcaagctgttcccag 306
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 264 aagacaccgtcgtcactggactggccggattcaagattaatactttcaagctgttcccag 323
Query: 307 aaaaaggcaaagcaattgtcgactttacagccaatgtgactttaaaggctcactacataa 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaaaaggcaaagcaattgtcgactttacagccaatgtgactttaaaggctcactacataa 383
Query: 367 tggatg 372
||||||
Sbjct: 384 tggatg 389
Score = 200 bits (101), Expect = 4e-51
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 1024 gctgaaacaatagacgcagtgatcaacgaacattgggaaccagtgataagagacatagcg 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gctgaaacaatagacgcagtgatcaacgaacattgggaaccagtgataagagacatagcg 794
Query: 1084 ccagtggccttcaaaacaatcatcaacgcgtgtgtcaacga 1124
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ccagtggccttcaaaacaatcatcaacgcgtgtgtcaacga 835
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 126,961
Number of extensions: 2470
Number of successful extensions: 2470
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2470
Number of HSP's successfully gapped: 3
Length of query: 1162
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1145
Effective length of database: 8,119,229
Effective search space: 9296517205
Effective search space used: 9296517205
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)