BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03373 (UTR included)
(3250 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015A1B01 1403 0.0
BF01013B2C05 1142 0.0
BF01049B2H02 416 e-116
>BF01015A1B01
Length = 740
Score = 1403 bits (708), Expect = 0.0
Identities = 732/740 (98%)
Strand = Plus / Plus
Query: 1805 cgagtgggccaagctggccaagtgggccatccactatgacgtgcactcagacaacgtccg 1864
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 cgagtgggccaagctggccaagtgggccatccactatgacgtacactcagacaacgtccg 60
Query: 1865 ctggctcatacagataccgcgactatacgacatcttcaagtcgaacaagataatgaacaa 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctggctcatacagataccgcgactatacgacatcttcaagtcgaacaagataatgaacaa 120
Query: 1925 cttccaggagttcctgagcaacatctttctccccctgttcgaggtgacccgggaccccaa 1984
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 121 cttccaggagttcctgagcaacatcttcctccccctgttcgaggtgacccgggaccccaa 180
Query: 1985 cagtaacatcgagctgcacaagttcctcacccacgtggtcggcttcgacagtgtggacga 2044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagtaacatcgagctgcacaagttcctcacccacgtggtcggcttcgacagtgtggacga 240
Query: 2045 cgagtccaagcccgagaacccgatgctggaggcggacgtgcgcgaaccgcgggcctgggc 2104
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 241 cgagtccaagcccgagaacccgatgctggaggcggacgtgcgcgagccgcgggcctgggc 300
Query: 2105 cgacgacgagaacccgccctacgcctactacctgtactacatgtacgctaacatcaccgt 2164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgacgacgagaacccgccctacgcctactacctgtactacatgtacgctaacatcaccgt 360
Query: 2165 gctcaaccacttccggaaggagcagggtctgaacacgttcgtgctccgtcctcactgcgg 2224
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 361 gctcaaccacttccggaaggagcaaggtctgaacacgttcgtgctccgtcctcactgcgg 420
Query: 2225 ggaggccgggcccgtgcagcacctggtgtgcggcttcatgctggccgagaacatctcgca 2284
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 421 ggaggccgggcccgtgcagcacctggtgtgcggcttcatgttggccgagaacatctcgca 480
Query: 2285 cggactgctgctgaggaaggtgccggtgttgcagtacctgtactacctgtcccagatctc 2344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cggactgctgctgaggaaggtgccggtgttgcagtacctgtactacctgtcccagatctc 540
Query: 2345 catcgccatgtcgcccctcagcaacaactcccttttcctcaactaccaccgcaacccctt 2404
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 541 catcgccatgtcgcccctcagcaacaactccctcttcctcaactaccaccgcaacccctt 600
Query: 2405 gccggagttcctcgcccgcggtctctgcgtcaccctcagcacggacgacccgctgcagtt 2464
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 601 gccggagttcctcgcccgcggtctctgcgtcaccctcagcacggacgatccgctgcagtt 660
Query: 2465 ccacttcaccaaggaacccctgatggaggagtacagtatagctgcccaggtgtggaagct 2524
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 661 ccacttcaccaaggaacccctgatggaggagtacagtatcgctgcccaggtgtggaagct 720
Query: 2525 gagctcctgtgacatgtgcg 2544
||||||||||||||||||||
Sbjct: 721 gagctcctgtgacatgtgcg 740
>BF01013B2C05
Length = 766
Score = 1142 bits (576), Expect = 0.0
Identities = 588/592 (99%)
Strand = Plus / Plus
Query: 580 gtagtgaaagtccaacgagcgcggtgggggcggaatcgccgcgggagctcccaaatgagc 639
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 175 gtagtgaaagtccaacgagcgcggtgggggcggagtcgccgcgggagctcccaaatgagc 234
Query: 640 tctcagccccttacgaagtccctcagttccccatagaacagatagagaagaagctcctca 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 tctcagccccttacgaagtccctcagttccccatagaacagatagagaagaagctcctca 294
Query: 700 tacaacgacagttaaatgtcaaggcagcagaatgtggtcagtcagcacgctccctggccg 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tacaacgacagttaaatgtcaaggcagcagaatgtggtcagtcagcacgctccctggccg 354
Query: 760 gagacgccgtgctggaggaggcggcgaagcttcgggccactgacgatgacttcgacgtcg 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gagacgccgtgctggaggaggcggcgaagcttcgggccactgacgatgacttcgacgtcg 414
Query: 820 tcctaccacacttccaacgggtggccatcagcggagaagacacgtcgggggtaccgctgg 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tcctaccacacttccaacgggtggccatcagcggagaagacacgtcgggggtaccgctgg 474
Query: 880 aggatctccagcaggcgtcctcgtacctggtccaagctctagaaatccgtaagcgctaca 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 aggatctccagcaggcgtcctcgtacctggtccaagctctagaaatccgtaagcgctaca 534
Query: 940 tggacatctcccagcaaagtttctgcagcatcacggctcggttcctccgtagcatggaca 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tggacatctcccagcaaagtttctgcagcatcacggctcggttcctccgtagcatggaca 594
Query: 1000 gcgaggctgccgccaaccacaagcccagtgtgtccgtgcaaaaacatatcgctgatcaca 1059
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 595 gcgaggctgccgccaaccacacgcccagcgtgtccgtgcaaaaacatatcgctgatcaca 654
Query: 1060 tggtccatccgccattcaaagctaacaaggatccgtgggaggggcccactccttccgcca 1119
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tggtccacccgccattcaaagctaacaaggatccgtgggaggggcccactccttccgcca 714
Query: 1120 aggattacaccatcaaggcggacgacggggtgttcaacctgtaccggcagac 1171
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 aggattacaccatcaaggcggacgacggggtgttcaacctgtaccggcagac 766
>BF01049B2H02
Length = 774
Score = 416 bits (210), Expect = e-116
Identities = 255/271 (94%), Gaps = 1/271 (0%)
Strand = Plus / Minus
Query: 2968 gtacactgtatctatacctattgtaacttgtatcgttacgcataacgatggcgacattct 3027
||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 774 gtacactgtatctatacctattgtaacttgtatcgttacgcataatgaaagcgacatnnn 715
Query: 3028 tctaccttcccgccgctaactgtattctgtttgcttctgtgtgaatgttacaaagatttt 3087
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 nnnancttcccgccgctaactgtattctgtttgcttctgtgtgaatgttacaaagatttt 655
Query: 3088 taagtgttaaatatgacttttttggaaataacagcccattgtttataaataacatgttat 3147
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 654 taagtgttaaatatgactttttttgaaataacagccctttgtttataaataacatgttat 595
Query: 3148 agtggacacgaacgtgaattgccgacttctttatgtgcgtgtatacttttttaaatcatg 3207
|||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 594 agtggacaggaacgcgaattgccgagttctttatgtgcgtgtatacttttttaaatcatg 535
Query: 3208 gcacaggttatgtaagttttcactttttttt 3238
|||||||||||||||| ||||||||||||||
Sbjct: 534 gcacaggttatgtaag-tttcactttttttt 505
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 299,445
Number of extensions: 5459
Number of successful extensions: 5459
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5456
Number of HSP's successfully gapped: 4
Length of query: 3250
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3232
Effective length of database: 8,109,745
Effective search space: 26210695840
Effective search space used: 26210695840
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)