BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03389 (UTR included)
(3328 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B1F11 1187 0.0
>BF01055B1F11
Length = 789
Score = 1187 bits (599), Expect = 0.0
Identities = 633/648 (97%)
Strand = Plus / Plus
Query: 399 gtgaagacaaaaccatgaaatataaggcttatattgtattgttagtgttgttttgagaca 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 gtgaagacaaaaccatgaaatataaggcttatattgtattgttagtgttgttttgagaca 201
Query: 459 aatcttgttatgtttctgcgatataacatttaaatcgttaagatgggttgctgtgataat 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aatcttgttatgtttctgcgatataacatttaaatcgttaagatgggttgctgtgataat 261
Query: 519 tgctgtgtgccaccgaaagaatcaagagagcctataaaatataatccgaacttcaacggc 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgctgtgtgccaccgaaagaatcaagagagcctataaaatataatccgaacttcaacggc 321
Query: 579 ccgacccgcaaccgatcatgcacggatgtattatttttgattatgttcatcctttttctt 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ccgacccgcaaccgatcatgcacggatgtattatttttgattatgttcatcctttttctt 381
Query: 639 ggaggctggggcttcgtcggctattacagtataacacgagggagcgttgagaaactttta 698
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 382 ggaggctggggcttcgtcggctattatagtataacacgagggagcgttgagaaactttta 441
Query: 699 gcacctatagactcgaaaggccgccgttgtggtgtggattccggccttgaggataggaaa 758
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 442 gcacctatagactcgaaaggccgccgctgtggtgtggattccggccttgaggataggaaa 501
Query: 759 tatcttgtattcttcaacatcgcaaaatgtctgtcgcccggcactcctataactggttgt 818
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 502 tatcttgtattcttcaacatcgcgaaatgtctgtcgcccggcactcctataactggttgt 561
Query: 819 cccactgcacaagtatgtgtgcaaaagtgtcctgagagaacttttatatttgaaaaagag 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 cccactgcacaagtatgtgtgcaaaagtgtcctgagagaacttttatatttgaaaaagag 621
Query: 879 ttaagacaaaatccagcttcgtttgaacaattaaggcagaatatggtgtgcaccgatgaa 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttaagacaaaatccagcttcgtttgaacaattaaggcagaatatggtgtgcaccgatgaa 681
Query: 939 gtcactaatatacaaactatgacgttatcggaggctatcgcgtacatgcaacaagaaaag 998
|||||||||||||||||||||||||| |||| ||||||||||||||||||| |
Sbjct: 682 gtcactaatatacaaactatgacgttctcggnnnctatcgcgtacatgcaacannnnnng 741
Query: 999 tgcgccagttttgtgttacagagtcaaccagtgttgtaccgttgcatc 1046
||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 742 tgcgccagttttgtgttacagnntcaaccagtgttgtaccgttgcatc 789
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 424,716
Number of extensions: 21987
Number of successful extensions: 21987
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 21986
Number of HSP's successfully gapped: 1
Length of query: 3328
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3310
Effective length of database: 8,109,745
Effective search space: 26843255950
Effective search space used: 26843255950
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)