BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03397 (UTR included)
(1894 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1271_C1 1818 0.0
>BF14_1271_C1
Length = 930
Score = 1818 bits (917), Expect = 0.0
Identities = 926/929 (99%)
Strand = Plus / Plus
Query: 471 gaggtgtaggattgttcttttattattaaaatggctttcgtgaaagtggtcaagaacaag 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaggtgtaggattgttcttttattattaaaatggctttcgtgaaagtggtcaagaacaag 61
Query: 531 caatactttaagcgttaccaagttaaattcaagaggcgtcgccagggaaaaactgattat 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 caatactttaagcgttaccaagttaaattcaagaggcgtcgccagggaaaaactgattat 121
Query: 591 tatgcacgtaaacgactaatcgttcaggacaagaacaaatacaacactcctaaataccgc 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tatgcacgtaaacgactaatcgttcaggacaagaacaaatacaacactcctaaataccgc 181
Query: 651 atcattgtccgtctctcaaacaaggatgtgacctgccagattgcttactctcgcattgag 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atcattgtccgtctctcaaacaaggatgtgacctgccagattgcttactctcgcattgag 241
Query: 711 ggtgatcacattgtgtgcgcagcgtactcacatgaattacctcgttatggtatcaaggtg 770
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggtgatcacattgtgtgcgcagcttactcacatgaattacctcgttatggtatcaaggtg 301
Query: 771 ggtttgaccaactatgctgcagcctactgcactggtcttttggtagccagacgtcttctc 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggtttgaccaactatgctgcagcctactgcactggtcttttggtagccagacgtcttctc 361
Query: 831 caaaggctgggccttgactccttatatgcaggagccaccgaagtgactggtgatgagttc 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 caaaggctgggccttgactccttatatgcaggagccaccgaagtgactggtgatgagttc 421
Query: 891 aacgtagaacctgtagacaatggtcctggtgcattcagatgttacttggatgttggtctt 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aacgtagaacctgtagacaatggtcctggtgcattcagatgttacttggatgttggtctt 481
Query: 951 gcaagaactaccaccggtgctcgtgtgtttggggccatgaagggtgctgttgatggtggc 1010
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gcaagaactaccaccggtgcccgtgtgtttggggccatgaagggtgctgttgatggtggc 541
Query: 1011 cttaatgttccccactccattaagagattccctggatttgatgccgaagcaaagaaattc 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cttaatgttccccactccattaagagattccctggatttgatgccgaagcaaagaaattc 601
Query: 1071 aatgctgaggttcacagggctcacatctttggtcttcatgtggcagaatacatgaaaaat 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aatgctgaggttcacagggctcacatctttggtcttcatgtggcagaatacatgaaaaat 661
Query: 1131 ctggaacaggaagatgaagattcattcaagagacaatttggaaagtacatcaagctcgga 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ctggaacaggaagatgaagattcattcaagagacaatttggaaagtacatcaagctcgga 721
Query: 1191 gtctctgctgatgctatcgagagcctgtacaagaaagcccatgagttaatccgtgcggat 1250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gtctctgctgatgctatcgagagcctgtacaagaaagcccatgagttaatccgtgcggat 781
Query: 1251 ccttcacacaagaagaaggagagcaagaaagacccagctaaacaaaaacgctggaacaag 1310
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 782 ccttcacacaagaagaaggagagcaagaaagacccagccaaacaaaaacgctggaacaag 841
Query: 1311 cgcaagctgacactggctgagaggaagaacaggattaagcagaagaaggcttctttcatc 1370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 cgcaagctgacactggctgagaggaagaacaggattaagcagaagaaggcttctttcatc 901
Query: 1371 aagagattgcaggcagaagcataagagct 1399
|||||||||||||||||||||||||||||
Sbjct: 902 aagagattgcaggcagaagcataagagct 930
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 252,277
Number of extensions: 5484
Number of successful extensions: 5484
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5484
Number of HSP's successfully gapped: 1
Length of query: 1894
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1877
Effective length of database: 8,119,229
Effective search space: 15239792833
Effective search space used: 15239792833
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)