BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03443 (UTR included)
(1129 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 105 2e-22
BF14_335_C2 74 5e-13
>BF01019A1H08
Length = 504
Score = 105 bits (53), Expect = 2e-22
Identities = 89/101 (88%)
Strand = Plus / Minus
Query: 503 acacctgggtcgcaagtcccaggcaaagtcgcagctcctctccctccaccgcgatggacc 562
||||||||||||||| ||||||||| || | ||||||||||||| || |||||||||||
Sbjct: 469 acacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaacgcgatggacc 410
Query: 563 cggcacccacatggtgaattcatggtatgctaagaggtttc 603
|||||||| || ||||||| ||| | |||||||||||||||
Sbjct: 409 cggcacccgcacggtgaatccattgaatgctaagaggtttc 369
>BF14_335_C2
Length = 1827
Score = 73.8 bits (37), Expect = 5e-13
Identities = 85/101 (84%)
Strand = Plus / Minus
Query: 503 acacctgggtcgcaagtcccaggcaaagtcgcagctcctctccctccaccgcgatggacc 562
||||||| ||||||| ||||||||| || | ||||||||||||| || |||| |||||
Sbjct: 913 acacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacgcggcggacc 854
Query: 563 cggcacccacatggtgaattcatggtatgctaagaggtttc 603
|||||||| || ||||||| ||| | | |||||||||||||
Sbjct: 853 cggcacccgcacggtgaatccatagaaagctaagaggtttc 813
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 214,350
Number of extensions: 5430
Number of successful extensions: 5430
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5430
Number of HSP's successfully gapped: 2
Length of query: 1129
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1112
Effective length of database: 8,119,229
Effective search space: 9028582648
Effective search space used: 9028582648
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)