BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03453 (UTR included)
(3571 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060B2F03 224 8e-58
>BF01060B2F03
Length = 794
Score = 224 bits (113), Expect = 8e-58
Identities = 125/129 (96%)
Strand = Plus / Minus
Query: 3443 aaaaaaaaaaatcgaccaaaatactttttactgtcgacataagaccgacttgaatatgcg 3502
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 789 aaaaaaaaaaaacgaccaaaatactttttactgtcgacataagaccgatttgaatatgcg 730
Query: 3503 gaataaaataagaattcacgaaaaatacacgcagacatgtgaacaggaggaggctaggtt 3562
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 729 gaataaaataagaattcacgaaaaatacacgcagacatgtaaacaggaggaggctaagtt 670
Query: 3563 aataataaa 3571
|||||||||
Sbjct: 669 aataataaa 661
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 435,526
Number of extensions: 11218
Number of successful extensions: 11218
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11218
Number of HSP's successfully gapped: 1
Length of query: 3571
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3553
Effective length of database: 8,109,745
Effective search space: 28813923985
Effective search space used: 28813923985
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)