BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03459 (UTR included)
(2017 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01004X1G10 799 0.0
>BF01004X1G10
Length = 681
Score = 799 bits (403), Expect = 0.0
Identities = 457/474 (96%), Gaps = 2/474 (0%)
Strand = Plus / Minus
Query: 1370 aggcatccgcaaaaacaagaagtgcatctgcataccgacgtttctgaaacttcttttgga 1429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 aggcatccgcaaaaacaagaagtgcatctgcataccgacgtttctgaaacttcttttgga 415
Query: 1430 tctacacaacctattgccctacagggttcgaattatcttcacagatttcttcaatttcgg 1489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tctacacaacctattgccctacagggttcgaattatcttcacagatttcttcaatttcgg 355
Query: 1490 atcccgcgggtggttttgtttttgctaaggaaatctttatattaagaaaatcact--ttt 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 354 atcccgcgggtggttttgtttttgctaaggaaatctttatattaagaaaatcactatttt 295
Query: 1548 ttttttatcggcatatacctcacaaaattttggtgatttttcacttattaattaaatgta 1607
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ttttttatcggcatatacctgtcaaaattttggtgatttttcacttattaattaaatgta 235
Query: 1608 tcttttagaacgttaagctttattttgtcatatttattataaacaaactgtaaaaatttt 1667
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 234 tcttttagaacgttaagctttattttgtcatatttattataaagaaactgtaaaattttt 175
Query: 1668 ggatttttatttatttaacttgcttttaaaataaatgacaatagaatgtagtgaaaatta 1727
||| |||||||||||||||||||||| ||||| ||| | |||||| ||||||||||||||
Sbjct: 174 ggacttttatttatttaacttgctttaaaaattaataaaaatagagtgtagtgaaaatta 115
Query: 1728 tttaaccacttcagattttaagaaatgagaagaaatctcatcgaagtttccgcagttttt 1787
|||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||
Sbjct: 114 tttaaccacttcagattttaagaaatgaaaagaaatctcgtcgaagtttccgcagtgttt 55
Query: 1788 caagaccaaagatttcaagtaatatttgttgcgagtaatctcatatgtatcaga 1841
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 caagacaaaagctttcaagtaatatttgttgcgagtaatctcatatgtatcaga 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 296,439
Number of extensions: 6824
Number of successful extensions: 6824
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6823
Number of HSP's successfully gapped: 1
Length of query: 2017
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2000
Effective length of database: 8,119,229
Effective search space: 16238458000
Effective search space used: 16238458000
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)