BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03462 (UTR included)
(2353 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042A2H12 1403 0.0
BF01034A2H04 1292 0.0
BF01029B1E07 587 e-167
>BF01042A2H12
Length = 735
Score = 1403 bits (708), Expect = 0.0
Identities = 730/736 (99%), Gaps = 1/736 (0%)
Strand = Plus / Plus
Query: 1376 caaggtcggggcgctgcgttctatgtccatacaagacaacgacgaggctgaaaactctga 1435
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaggtcggggcgctgcgatctatgtccatacaagacaacgacgaggctgaaaactctga 60
Query: 1436 tgaagtcccaaaaccagatgaagcttataatattgatattcctggttccaccacgttgtg 1495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaagtcccaaaaccagatgaagcttataatattgatattcctggttccaccacgttgtg 120
Query: 1496 ggaagcgcgtcccagaccaagcaacagtgcacagtattaccagttcactgaattcgcaat 1555
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 ggaggcgcgtcccagaccaagcaatagtgcacagtattaccagttcactgaattcgcaat 180
Query: 1556 gtctctgaacgagttggagcgcgatatgaagagccagctgtgtcctacagacagccgcct 1615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtctctgaacgagttggagcgcgatatgaagagccagctgtgtcctacagacagccgcct 240
Query: 1616 gcgccccgacataaggttgttggaggctggcgacattgacggcgctgcagcggagaagac 1675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcgccccgacataaggttgttggaggctggcgacattgacggcgctgcagcggagaagac 300
Query: 1676 tcgtctagaagagaaacagcgtacagcgcggaaagtgcttaaaaagagcgctgacggctg 1735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcgtctagaagagaaacagcgtacagcgcggaaagtgcttaaaaagagcgctgacggctg 360
Query: 1736 gcaggcgaggtggttcagtcaaggtacaaatccgtatacgaagcaagaggactggcttta 1795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcaggcgaggtggttcagtcaaggtacaaatccgtatacgaagcaagaggactggcttta 420
Query: 1796 caacggcggctactgggaccgtaactatcagcatctgaaggatgtcgatatattttaata 1855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caacggcggctactgggaccgtaactatcagcatctgaaggatgtcgatatattttaata 480
Query: 1856 tttcaatagccatttaattgattgttgcttagaaaattattacgtgtacttgatatgggt 1915
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 481 tttcaatagccatttaattgattgctgcttagaaaattattacgtgtacttgatatgggt 540
Query: 1916 tgccggatctcgtgatttaaacgaggaacttacaatattagtcacctgacatttttaaat 1975
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgccggatctcgtgatttatacgaggaacttacaatattagtcacctgacatttttaaat 600
Query: 1976 ttgtcaagtcggtctaatgtttcgtgtattcttcttgccacagaggcttatggacacggc 2035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttgtcaagtcggtctaatgtttcgtgtattcttcttgccacagaggcttatggacacggc 660
Query: 2036 aatttataaaaccaagaccatatcgtctaatattgtaaatcttcaggtggcaaccctata 2095
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aa-ttataaaaccaagaccatatcgtctaatattgtaaatcttcaggtggcaaccctata 719
Query: 2096 aagtttaaattatacg 2111
||||||||||||||||
Sbjct: 720 aagtttaaattatacg 735
>BF01034A2H04
Length = 734
Score = 1292 bits (652), Expect = 0.0
Identities = 667/672 (99%)
Strand = Plus / Plus
Query: 536 gacttcgttaccagtggctcaattcagccgaggtgatttctcgctgtggtcggttttgaa 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gacttcgttaccagtggctcaattcagccgaggtgatttctcgctgtggtcggttttgaa 122
Query: 596 gaactgcgtcggcaaggaactgtccaagatcacgatgccggtggtgttcaacgaaccgct 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gaactgcgtcggcaaggaactgtccaagatcacgatgccggtggtgttcaacgaaccgct 182
Query: 656 gtctttcctgcagcggatgctggagtacctggagtacgcgcacctgctgaggctggcctc 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gtctttcctgcagcggatgctggagtacctggagtacgcgcacctgctgaggctggcctc 242
Query: 716 ggagcaaaccgaccctgttgcacggatggagcatattgctgctttcgctgtcagtgctct 775
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ggagcaaactgaccctgttgcacggatggagcatattgctgctttcgctgtcagtgctct 302
Query: 776 ggcatcaaactgggagcgtctgggtaaacctttcaaccctctcctgggagagacctacga 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ggcatcaaactgggagcgtctgggtaaacctttcaaccctctcctgggagagacctacga 362
Query: 836 attggagagaccagagttcagagcagtttgcgaacaggtatctcatcatcctccagtttc 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 363 attggagagaccagagttcagagcagtttgcgaacaggtatctcatcatcctccagtgtc 422
Query: 896 cgccttccacgctgacagtcctcacttcgtgttccacggctcagttcatcccaaattgaa 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cgccttccacgctgacagtcctcacttcgtgttccacggctcagttcatcccaaattgaa 482
Query: 956 gttttgcggaaagagtgtggaaatacagcccaagggacacgtcaccgtggaacttccgag 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gttttgcggaaagagtgtggaaatacagcccaagggacacgtcaccgtggaacttccgag 542
Query: 1016 atggggtgaagcttatacctggacgaacgtgaactgctgcgttcacaatgtgatcgtcgg 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 atggggtgaagcttatacctggacgaacgtgaactgctgcgttcacaatgtgatcgtcgg 602
Query: 1076 gaagctgtggatcgagcagtacggggccatggaggtcacttgtcacggcggcgcgggcct 1135
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 caagctgtggatcgaacagtacggggccatggaggtcacttgtcacggcggcgcgggcct 662
Query: 1136 gaaagccaacctctcattcaaacccgccgggttcaataacagagacctccatagagttga 1195
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 663 gaaagccaacctctcattcaaacccgccgggttcaataacagagacctccacagagttga 722
Query: 1196 cggatttatcat 1207
||||||||||||
Sbjct: 723 cggatttatcat 734
>BF01029B1E07
Length = 636
Score = 587 bits (296), Expect = e-167
Identities = 321/330 (97%)
Strand = Plus / Plus
Query: 2024 tatggacacggcaatttataaaaccaagaccatatcgtctaatattgtaaatcttcaggt 2083
||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 1 tatggacacggtaatttataaaaccaagaccnnttcaactaatattgtaaatcttcaggt 60
Query: 2084 ggcaaccctataaagtttaaattatacgagatatatgctttggatagacacaaagcactg 2143
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61 ggcaaccctataaagtttaaattatacgagatatatgctttggatacacacaaagcactg 120
Query: 2144 ctcaataaataaattaaatgcacaagagcataaacagtatgtaagctatttgattttaaa 2203
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 121 ctcaataaataaattaaatgcacaagagcataaacagtgtgtaagctatttgattttaaa 180
Query: 2204 taaagcgacaacatgttttattcataacatgcttcgtaagtcagaacaaagttttactta 2263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taaagcgacaacatgttttattcataacatgcttcgtaagtcagaacaaagttttactta 240
Query: 2264 ttttactcatagtttaaaccaaaatctccaatagagtcgtttcttatttaaaaatatgtc 2323
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttttactcatagtttaaaccaagatctccaatagagtcgtttcttatttaaaaatatgtc 300
Query: 2324 tccacacaattaatcttccgatataaacat 2353
||||||||||||||||||||||||||||||
Sbjct: 301 tccacacaattaatcttccgatataaacat 330
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 231,572
Number of extensions: 4569
Number of successful extensions: 4569
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4567
Number of HSP's successfully gapped: 3
Length of query: 2353
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2336
Effective length of database: 8,119,229
Effective search space: 18966518944
Effective search space used: 18966518944
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)