BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03494 (UTR included)
(1771 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062A2B03 674 0.0
BF01007X1C02 553 e-157
>BF01062A2B03
Length = 801
Score = 674 bits (340), Expect = 0.0
Identities = 349/352 (99%)
Strand = Plus / Plus
Query: 917 ggtgctcagccttcagcatccgcacacgtatgctggaccgccggccgttgggtatcctgt 976
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgctcagcctacagcatccgcacacgtatgctggaccgccggccgttgggtatcctgt 60
Query: 977 aggtggtacctggagtcccaacgtggacgtggagtgtgagagagccttcttcatcaggat 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggtggtacctggagtcccaacgtggacgtggagtgtgagagagccttcttcatcaggat 120
Query: 1037 gaagtgcgtcctcgctaagaggaacgctggcctcaccacgtcagggtataaggtcatcca 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaagtgcgtcctcgctaagaggaacgctggcctcaccacgtcagggtataaggtcatcca 180
Query: 1097 ctgttctggatacctccgcgcccgccgcttcggcgacggcacggctcctctcgggctggt 1156
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 181 ctgttctggatacctccgcgcccgccgcttcggcgacggcacggctctcctcgggctggt 240
Query: 1157 cgccgtcggccactccctcccgccgtcagccgtcaccgagctgaagctccactccaacat 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgccgtcggccactccctcccgccgtcagccgtcaccgagctgaagctccactccaacat 300
Query: 1217 gttcatgttccgcgcctcgctggacatgaggctcatcttcctggacgccagg 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttcatgttccgcgcctcgctggacatgaggctcatcttcctggacgccagg 352
>BF01007X1C02
Length = 710
Score = 553 bits (279), Expect = e-157
Identities = 282/283 (99%)
Strand = Plus / Plus
Query: 986 ctggagtcccaacgtggacgtggagtgtgagagagccttcttcatcaggatgaagtgcgt 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggagtcccaacgtggacgtggagtgtgagagagccttcttcatcaggatgaagtgcgt 60
Query: 1046 cctcgctaagaggaacgctggcctcaccacgtcagggtataaggtcatccactgttctgg 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 61 cctcgctaagaggaacgctggcctcaccacgtcagggtataaggtcatccactgttccgg 120
Query: 1106 atacctccgcgcccgccgcttcggcgacggcacggctcctctcgggctggtcgccgtcgg 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atacctccgcgcccgccgcttcggcgacggcacggctcctctcgggctggtcgccgtcgg 180
Query: 1166 ccactccctcccgccgtcagccgtcaccgagctgaagctccactccaacatgttcatgtt 1225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccactccctcccgccgtcagccgtcaccgagctgaagctccactccaacatgttcatgtt 240
Query: 1226 ccgcgcctcgctggacatgaggctcatcttcctggacgccagg 1268
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccgcgcctcgctggacatgaggctcatcttcctggacgccagg 283
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 163,610
Number of extensions: 3139
Number of successful extensions: 3139
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3139
Number of HSP's successfully gapped: 2
Length of query: 1771
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1754
Effective length of database: 8,119,229
Effective search space: 14241127666
Effective search space used: 14241127666
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)