BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03501 (UTR included)
(1984 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01032B1E09 272 2e-72
BF14_673_C1 113 1e-24
BF14_736_C1 100 2e-20
BF01054B2B08 96 3e-19
BF01059A2H01 90 2e-17
BF01062A1F03 88 6e-17
BF01021B1D03 80 2e-14
>BF01032B1E09
Length = 761
Score = 272 bits (137), Expect = 2e-72
Identities = 137/137 (100%)
Strand = Plus / Plus
Query: 618 gacgaggactgcgaggacagttcatcacacgtgtggctccctggggctagatacaggccg 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gacgaggactgcgaggacagttcatcacacgtgtggctccctggggctagatacaggccg 684
Query: 678 gagcccccggagaccttggcgagagcatcacacttcacgccgcatgagataaagctcatg 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gagcccccggagaccttggcgagagcatcacacttcacgccgcatgagataaagctcatg 744
Query: 738 tacaggggctttaaaca 754
|||||||||||||||||
Sbjct: 745 tacaggggctttaaaca 761
>BF14_673_C1
Length = 1197
Score = 113 bits (57), Expect = 1e-24
Identities = 99/113 (87%)
Strand = Plus / Minus
Query: 498 ccgatgagtgagagagccagttgccctttccctgtccccaccctttcctcttgctctctc 557
||||||||||||| | | |||||||||||||| | ||| || ||||||||| ||||| |
Sbjct: 1091 ccgatgagtgagaaaaacggttgccctttcccttttcccgccttttcctcttcctctccc 1032
Query: 558 gcaatcagagtcggcaacgcatccgcaacatcccttatgttgcagatgtccat 610
||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 acaaccaaggtcggcaacgcatccgcaacatcccttatgttgcagatgtccat 979
>BF14_736_C1
Length = 796
Score = 99.6 bits (50), Expect = 2e-20
Identities = 131/158 (82%)
Strand = Plus / Plus
Query: 389 ctagctgtggttaagttactataccttgtagatgggctagttcgaccagggaagtactac 448
||||||||||| ||||||||| | || | | ||||||| | |||||| ||||||||| ||
Sbjct: 594 ctagctgtggtcaagttactacagctcgaacatgggctggctcgaccggggaagtaccac 653
Query: 449 tctcttaaagaagaccggcatgtattagtctgtaatggctgcattccgtccgatgagtga 508
|||| | |||||| |||| || | |||||| || ||||||| || ||||| ||||||||
Sbjct: 654 cctctcacagaagatcggcgtgaagtagtctttagtggctgcgtttcgtccaatgagtga 713
Query: 509 gagagccagttgccctttccctgtccccaccctttcct 546
||||||| |||||||||||| || | |||||||||||
Sbjct: 714 gagagccggttgccctttccgcgttctcaccctttcct 751
>BF01054B2B08
Length = 807
Score = 95.6 bits (48), Expect = 3e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 475 agtctgtaatggctgcattccgtccgatgagtgagagagccagttgccctttccctgtcc 534
||||| |||||||||| || ||| ||||||||||||||||| |||||||||||||||| |
Sbjct: 674 agtctttaatggctgcgtttcgttcgatgagtgagagagccggttgccctttccctgttc 733
Query: 535 ccaccctttcct 546
||||||||||||
Sbjct: 734 ccaccctttcct 745
>BF01059A2H01
Length = 865
Score = 89.7 bits (45), Expect = 2e-17
Identities = 81/93 (87%)
Strand = Plus / Minus
Query: 438 ggaagtactactctcttaaagaagaccggcatgtattagtctgtaatggctgcattccgt 497
|||||||| || |||| | |||||| ||||||| | |||||| |||||||||| | | |
Sbjct: 291 ggaagtaccaccctctcacagaagatcggcatggagtagtctttaatggctgcgattctt 232
Query: 498 ccgatgagtgagagagccagttgccctttccct 530
|||||||||||||||||||||||||||||||||
Sbjct: 231 ccgatgagtgagagagccagttgccctttccct 199
>BF01062A1F03
Length = 800
Score = 87.7 bits (44), Expect = 6e-17
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 570 ggcaacgcatccgcaacatcccttatgttgcagatgtccatgggcgac 617
|||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 620 ggcaacgcatccgcaacatctcttatgttgcagatgtccatgggcgac 667
>BF01021B1D03
Length = 796
Score = 79.8 bits (40), Expect = 2e-14
Identities = 47/48 (97%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 1647 ctttccttctatctttaactctcagcc-tcacgaactgattgctcact 1693
||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 ctttccttctatctttaactctcagccttcacgaactgattgctcact 48
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 198,438
Number of extensions: 3780
Number of successful extensions: 3780
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 3779
Number of HSP's successfully gapped: 7
Length of query: 1984
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1967
Effective length of database: 8,119,229
Effective search space: 15970523443
Effective search space used: 15970523443
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)