BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03509 (UTR included)
(1414 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1773_C1 1403 0.0
>BF14_1773_C1
Length = 761
Score = 1403 bits (708), Expect = 0.0
Identities = 752/767 (98%), Gaps = 6/767 (0%)
Strand = Plus / Plus
Query: 463 catttgttaatagcgttgtattttactattctattaaaatgacagacaacttagacgacc 522
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 catttgttaatagcgttgtattttactattctattaaaatgactgacaacttagacgacc 60
Query: 523 tcgctataaacaagttgagggactacgttcgcattcgaagcgtccatccaaatattaatt 582
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgctataaacaagttgagggactatgttcgcattcgaagcgtccatccaaatattaatt 120
Query: 583 atgatgaatgcatatcgtatctcaggagatacgcaaatgatttgggtttacaggtccagg 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgatgaatgcatatcgtatctcaggagatacgcaaatgatttgggtttacaggtccagg 180
Query: 643 tgttcgaaacggttccaaagaaacccgtccttgttatgacctgggagggtttagaaccag 702
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 181 tgttcgaaacagttccaaagaaacccgtccttgtgatgacctgggagggtttagaaccag 240
Query: 703 aactgccgagcatcctgttaaactctcatatggatgtcgtgcccgtttttgaggaaagct 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aactgccgagcatcctgttaaactctcatatggatgtcgtgcccgtttttgaggaaagct 300
Query: 763 ggacatacaaaccattcgaggctcgacttgtggatggagttatctacggacgaggcgtgc 822
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggacctacaatccattcgaggctcgacttgtggatggagttatctacggacgaggcgtgc 360
Query: 823 aagacatgaaatcagttgctatcagttatttagaagcggtacggaggctcaagaataggg 882
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 361 aagacatgaaatcagttgctatcagttatttagaagcggtacggagactcaagaataggg 420
Query: 883 gaatacgactaaaaaggaccgtacatttgagttttgtgccaggaaagtacgaggaaaaag 942
||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 421 gaatacgactaaaaaggactgtacatttgagttttgtgccag------acgaggaaaaag 474
Query: 943 gcggtgttttgggcatgaagacgtttgtaacgtctgaacactacaacaaactgaacgttg 1002
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gaggtgttttgggcatgaagacgtttgtaacgtctgaacactacaacaaactgaacgttg 534
Query: 1003 gcttcgcttttgacgaaggactcgcaagtccagatgatagctttgtcgtttataatggag 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gcttcgcttttgacgaaggactcgcaagtccagatgatagctttgtcgtttataatggag 594
Query: 1063 agagaactatatggcatttgaaagtcatctgtccgggaatgtcaggccacggatcgcttc 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 agagaactatatggcatttgaaagtcatctgtccgggaatgtcaggccacggatcgcttc 654
Query: 1123 tattaccggataattgtggggaaaagttgaggtacatgatagacaagtttatggacctcc 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tattaccggataattgtggggaaaagttgaggtacatgatagacaagtttatggacctcc 714
Query: 1183 ggaacgagtcaaagaaaaagttggagaacgatccagaacttaccatc 1229
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ggaacgagtcaaagaaaaagttggagaacgatccagaacttaccatc 761
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 187,115
Number of extensions: 4519
Number of successful extensions: 4519
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4519
Number of HSP's successfully gapped: 2
Length of query: 1414
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1397
Effective length of database: 8,119,229
Effective search space: 11342562913
Effective search space used: 11342562913
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)