BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03532 (UTR included)
(1675 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01007X1D06 1637 0.0
>BF01007X1D06
Length = 842
Score = 1637 bits (826), Expect = 0.0
Identities = 838/842 (99%)
Strand = Plus / Plus
Query: 412 ttcttgttggggattctacaatttataaaacgtcttatacgaacataataatttaaaatc 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcttgttggggattctacaatttataaaacgtcttatacgaacataataatttaaaatc 60
Query: 472 attcaagaaatatacttaaaagctccaaaatgaatagattgtttggtcgaggaaagccaa 531
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 61 attcaagaaatatacttaaaagctccaaaatgaatagattatttggtcgaggaaagccaa 120
Query: 532 aaaccccagggcccagtataacagactgcataagcagtgttgatgcacgagctgataata 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaccccagggcccagtataacagactgcataagcagtgttgatgcacgagctgataata 180
Query: 592 tagaacaaaaagtccaaaaactagatgctgagctaagaaaatacaaagatcaaatggcta 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tagaacaaaaagtccaaaaactagatgctgagctaagaaaatacaaagatcaaatggcta 240
Query: 652 aaatgagagaaggtccttctaaaaattctgtcaaacaaaaggctatgagggtattgaagc 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaatgagagaaggtccttctaaaaattctgtcaaacaaaaggctatgagggtattgaagc 300
Query: 712 aaaagaaaatgtatgagcaacaattggaaaacttgagatcccaatcatttaatatggagc 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaagaaaatgtatgagcaacaattggaaaacttgagatcccaatcatttaatatggagc 360
Query: 772 aagcaaactatgcaacacaaacactaaaagatacacatgcaaccatctctgctatgaagg 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagcaaactatgcaacacaaacactaaaagatacacatgcaaccatctctgctatgaagg 420
Query: 832 atggcgtgtcctcgatgaagaaggaatttaaaaaaattaatattgacgatattgatgatg 891
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atggtgtgtcctcgatgaagaaggaatttaaaaaaattaatattgacgatattgatgatg 480
Query: 892 ttaatgatgaattggctgatatgttggaacaagctgatgaagtgcaagaggctctgggcc 951
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 481 ttaatgatgaattggctgatatgttggaacaagctgatgaagtgcaagaggctttgggcc 540
Query: 952 gtcagtatggcatgccagagattgatgacgatgagctagcagctgagttggatgcacttg 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtcagtatggcatgccagagattgatgacgatgagctagcagctgagttggatgcacttg 600
Query: 1012 gcgatgagatagcattagatgatgattcatcttatctggatgatgttgtgaaagctcccg 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcgatgagatagcattagatgatgattcatcttatctggatgatgttgtgaaagctcccg 660
Query: 1072 cagccccggataaggagcctggagtagacagcatcaggaacaaagatggtgtgcctgttg 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 661 cagccccggataaggagcctggagtagacagcatcaggaacaaagatggtgtgccggttg 720
Query: 1132 acgaattcggtctgccacaagtaccagcccagacctctcgctaggattagtaaagactat 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 acgaattcggtctgccacaagtaccagcccagacctctcgctaggattagtaaagactat 780
Query: 1192 gtgatggttcaaccctaaatggttatggtgatatcaagtatatggaagtctatagtaatt 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gtgatggttcaaccctaaatggttatggtgatatcaagtatatggaagtctatagtaatt 840
Query: 1252 tg 1253
||
Sbjct: 841 tg 842
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 280,725
Number of extensions: 7632
Number of successful extensions: 7632
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7632
Number of HSP's successfully gapped: 1
Length of query: 1675
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1658
Effective length of database: 8,119,229
Effective search space: 13461681682
Effective search space used: 13461681682
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)