BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03558 (UTR included)
(2083 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3020_C1 1673 0.0
>BF14_3020_C1
Length = 864
Score = 1673 bits (844), Expect = 0.0
Identities = 859/864 (99%)
Strand = Plus / Plus
Query: 570 agtaacagtcgcgaaagggtcgaacacttgatcagcaaatatgtcccggctaatagagtt 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtaacagtcgcgaaagggtcgaacacttgatcagcaaatatgtcccggctaatagagtt 60
Query: 630 actgctatcgccgagaagttcagacacgaaggtgtcaccaacaaggttaaggaactggtg 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actgctatcgccgagaagttcagacacgaaggtgtcaccaacaaggttaaggaactggtg 120
Query: 690 tctagatacgagaaattcacaggtatcgaagaaattatggcgatacagaacacggtcgtc 749
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctagatacgaaaaattcacaggtatcgaagaaattatggcgatacagaacacggtcgtc 180
Query: 750 gaagcacaggaacgtttcgtgacggcccaagaccgtagacgtgatttaggacgtgagcta 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaagcacaggaacgtttcgtgacggcccaagaccgtagacgtgatttaggacgtgagcta 240
Query: 810 gccgcaatagatgctagattgaaggaactgcactcggaaatgcagaatactatgaagggc 869
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccacaatagatgctagattgaaggaactgcactcggaaatgcagaatactatgaagggc 300
Query: 870 gatgaaaaatatctacatctctgtacggaggagcacaagttaataatccaggagcgtgca 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatgaaaaatatctacatctctgtacggaggagcacaagttaataatccaggagcgtgca 360
Query: 930 ctccgaactcttttctttgaagctgagagggaagagagagaattgtttgcgacaatgtca 989
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctccgaacacttttctttgaagctgagagggaagagagagaattgtttgcgacaatgtca 420
Query: 990 gcggctgtgaagctgggacacgagagggagagggcccacgctgagagaaataaatattgg 1049
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcggctgtgaaactgggacacgagagggagagggcccacgctgagagaaataaatattgg 480
Query: 1050 tatattgttgcttctatacttggtacagtgttaggtatagcgggttcgaccatcaacaat 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tatattgttgcttctatacttggtacagtgttaggtatagcgggttcgaccatcaacaat 540
Query: 1110 catctcaaaatggctgaattccgtgatatgatggaacagcaaatggcgagaacagccagc 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 catctcaaaatggctgaattccgtgatatgatggaacagcaaatggcgagaacagccagc 600
Query: 1170 gtcctgtacacagtagctggtggagggaccgccaacaaggcggacatagccgaagctatg 1229
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 601 gtcctgtacacagtagctggtggaggaaccgccaacaaggcggacatagccgaagctatg 660
Query: 1230 aagacggaatttgcttaccaggagcaactcgcaaacaacctgaccgtaatgcaggataac 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aagacggaatttgcttaccaggagcaactcgcaaacaacctgaccgtaatgcaggataac 720
Query: 1290 atcaacaatctcataaacaagcaatcgtcgctgatagaccacttgaatcaccaagatcac 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atcaacaatctcataaacaagcaatcgtcgctgatagaccacttgaatcaccaagatcac 780
Query: 1350 gtgttggaaactcagatgcgtgaaataaaacggctgatactggccgcgtcacagaacagc 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gtgttggaaactcagatgcgtgaaataaaacggctgatactggccgcgtcacagaacagc 840
Query: 1410 gcgaaatctgacgctgaactggcc 1433
||||||||||||||||||||||||
Sbjct: 841 gcgaaatctgacgctgaactggcc 864
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 269,175
Number of extensions: 6031
Number of successful extensions: 6031
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6031
Number of HSP's successfully gapped: 1
Length of query: 2083
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2066
Effective length of database: 8,119,229
Effective search space: 16774327114
Effective search space used: 16774327114
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)