BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03568 (UTR included)
(1807 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2294_C1 1647 0.0
>BF14_2294_C1
Length = 847
Score = 1647 bits (831), Expect = 0.0
Identities = 843/847 (99%)
Strand = Plus / Plus
Query: 427 cgaaaggttggtgtttcttttgggtcacgaatctgttcgtggccgttagatcactttatt 486
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgaaaggctggtgtttcttttgggtcacgaatctgttcgtggccgttagatcactttatt 60
Query: 487 aaagtttaatcaagatggtgcagaagaagccgaaaaagaaggtagggaagaaagtagccg 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaagtttaatcaagatggtgcagaagaagccgaaaaagaaggtagggaagaaagtagccg 120
Query: 547 ccgctcccttggtggtgaagaaagttgaacctaaaaaggttgtcaacccactcttcgaaa 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgctcccttggtggtgaagaaagttgaacctaaaaaggttgtcaacccactcttcgaaa 180
Query: 607 agagaactaaggatttcgctatcggtcaaggaatccagccaacccgtgacctctcccgct 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agagaactaaggatttcgctatcggtcaaggaatccagccaacccgtgacctctcccgct 240
Query: 667 tcgtgagatggcccaagtacatccgcatccagaggcagaaggcggtgctgcagcgccgtc 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcgtgagatggcccaagtacatccgcatccagaggcagaaggcggtgctgcagcgccgtc 300
Query: 727 tcaaggtgccgcctccaatcaaccaattcacacagaccctagacaagaccacagccaaag 786
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 301 tcaaagtgccgcctccaatcaaccagttcacacagaccctagacaagaccacagccaaag 360
Query: 787 gtctgtttaagatcttggagaaatacagacctgagaccgaggcagtcaggaaggaacgac 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtctgtttaagatcttggagaaatacagacctgagaccgaggcagtcaggaaggaacgac 420
Query: 847 ttcgtaaagctgccgaggccaaggtcgccaagaaagatgagccgccagcaaaaaggccaa 906
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 421 ttcgtaaagctgccgaggccaaggtcgccaagaaagatgagccgccagcaaaaaggccga 480
Query: 907 ataccatccgttccggtaccaacaccgttaccaagctcgtggaaaagaagaaggcacagc 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ataccatccgttccggtaccaacaccgttaccaagctcgtggaaaagaagaaggcacagc 540
Query: 967 tggttgtgatcgcacatgatgttgatcccattgagttggtgcttttcctccccgctctgt 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tggttgtgatcgcacatgatgttgatcccattgagttggtgcttttcctccccgctctgt 600
Query: 1027 gccgtaagatgggtgtcccatactgcattgttaagggcaagtctcgtcttggagcgctag 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gccgtaagatgggtgtcccatactgcattgttaagggcaagtctcgtcttggagcgctag 660
Query: 1087 tgcacaggaagacatgcacatgtttggccttaactcatgtggagtctggtgaccgagctg 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgcacaggaagacatgcacatgtttggccttaactcatgtggagtctggtgaccgagctg 720
Query: 1147 ccttctcgaaggtagtggaagccatcaggaccaacttcaatgaacgttacgaggaactcc 1206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccttctcgaaggtagtggaagccatcaggaccaacttcaatgaacgttacgaggaactcc 780
Query: 1207 gaagacattggggcggtggcgccctcggtaacaagtcaaacgcgcgcatcgccaaactgg 1266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gaagacattggggcggtggcgccctcggtaacaagtcaaacgcgcgcatcgccaaactgg 840
Query: 1267 aaaaggc 1273
|||||||
Sbjct: 841 aaaaggc 847
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 266,001
Number of extensions: 6908
Number of successful extensions: 6908
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6908
Number of HSP's successfully gapped: 1
Length of query: 1807
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1790
Effective length of database: 8,119,229
Effective search space: 14533419910
Effective search space used: 14533419910
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)