BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03579 (UTR included)
(3472 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043A2C06 1409 0.0
BF01059B1H03 270 1e-71
BF01057A1A10 224 7e-58
>BF01043A2C06
Length = 791
Score = 1409 bits (711), Expect = 0.0
Identities = 720/723 (99%)
Strand = Plus / Plus
Query: 2080 cggccacgcggcccgtgtgccagtacgtgctgtctctggcgcgctacgactccagctacg 2139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 cggccacgcggcccgtgtgccagtacgtgctgtctctggcgcgctacgactccagctacg 128
Query: 2140 acgtgagagaccgcgcccgcttcctccgcagctgcctcgagggacgcctggccgagttcg 2199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 acgtgagagaccgcgcccgcttcctccgcagctgcctcgagggacgcctggccgagttcg 188
Query: 2200 ccagagagatcttctgcccggacacgcccaagcccagcgtgcaggcgaacaacaaagagc 2259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ccagagagatcttctgcccggacacgcccaagcccagcgtgcaggcgaacaacaaagagc 248
Query: 2260 gtactcattacacggtggggtctctgtctcagtacatcgggtcgtgtgcgtgcggctacc 2319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gtactcattacacggtggggtctctgtctcagtacatcgggtcgtgtgcgtgcggctacc 308
Query: 2320 gtccgttgccgacagcgccctctgcggacacgtgcgccgcgctccgggactccgcccccg 2379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gtccgttgccgacagcgccctctgcggacacgtgcgccgcgctccgggactccgcccccg 368
Query: 2380 ctgagacggagcccgagcgagacatggaccaacagaagaacaagagcttctactccgagc 2439
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 369 ctgagacggagcccgagcgagacatggaccagcagaagaacaagagcttctactccgagc 428
Query: 2440 ccggatccacgtcctcctcgtccagctccagcagcgaggagtccacagacgaagaggatt 2499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ccggatccacgtcctcctcgtccagctccagcagcgaggagtccacagacgaagaggatt 488
Query: 2500 ccaatgaggcggacgacaaacaagaaaaagctaaacaaatcaataattacaaatcctcct 2559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ccaatgaggcggacgacaaacaagaaaaagctaaacaaatcaataattacaaatcctcct 548
Query: 2560 catccggcaccagtgactcggagtcggacagctcgtcctcacagagcgacatcgactcgg 2619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 catccggcaccagtgactcggagtcggacagctcgtcctcacagagcgacatcgactcgg 608
Query: 2620 agactgatcaccaacaggacggagaagaaggagacggggcggacggagatgataagccac 2679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 agactgatcaccaacaggacggagaagaaggagacggggcggacggagatgataagccac 668
Query: 2680 cgaacaaacgggaaccggaagtcaaagaaaagaacgacaaatccaatctggagctgctcc 2739
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 669 cgaacaaacgggaaccggaagtcaaagaaaagaacgacaaatccaatctggaactgctcc 728
Query: 2740 ttgaactggacgaagtggcgagttcgttgcccaccatgacgcccacgtgcgggggcttcc 2799
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 729 ttgaactggacgaagtggcgagttcgctgcccaccatgacgcccacgtgcgggggcttcc 788
Query: 2800 tgt 2802
|||
Sbjct: 789 tgt 791
Score = 145 bits (73), Expect = 5e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1862 ggcgcgggccgccgtcagcagagctgccaaactgctccgatcagaccgcctggcgggcgg 1921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcgcgggccgccgtcagcagagctgccaaactgctccgatcagaccgcctggcgggcgg 60
Query: 1922 cgctcgtgcggcc 1934
|||||||||||||
Sbjct: 61 cgctcgtgcggcc 73
>BF01059B1H03
Length = 774
Score = 270 bits (136), Expect = 1e-71
Identities = 142/144 (98%)
Strand = Plus / Minus
Query: 1 gtgcacagccacttattaatatttaaaataaattgaactaattaaaccatttttgggaac 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 144 gtgcacagccacttattaataattaaaataaattgaactaattaaaccatttttgggaac 85
Query: 61 acaaaaccaattagactgccaaagagttaataaataagaatttatagcagaaactcaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 acaaaaccaattagactgccaaagagttaataaataagaatttatagcagaaactcaaca 25
Query: 121 cccatcaataaggcaaacggcttt 144
|||||||||||||||| |||||||
Sbjct: 24 cccatcaataaggcaagcggcttt 1
>BF01057A1A10
Length = 780
Score = 224 bits (113), Expect = 7e-58
Identities = 113/113 (100%)
Strand = Plus / Plus
Query: 3172 acggctccgtgagcgtgtccgtgagcccgccggtgggcgagctggtgcgtgccgtgcgcg 3231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 acggctccgtgagcgtgtccgtgagcccgccggtgggcgagctggtgcgtgccgtgcgcg 76
Query: 3232 tgtcgtcggccgtgtggaccaagacctgcaacgctctgcgaggaatgaacgag 3284
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 tgtcgtcggccgtgtggaccaagacctgcaacgctctgcgaggaatgaacgag 129
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 298,128
Number of extensions: 5937
Number of successful extensions: 5937
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5937
Number of HSP's successfully gapped: 4
Length of query: 3472
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3454
Effective length of database: 8,109,745
Effective search space: 28011059230
Effective search space used: 28011059230
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)