BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03580 (UTR included)
(2383 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059B1H03 981 0.0
>BF01059B1H03
Length = 774
Score = 981 bits (495), Expect = 0.0
Identities = 504/507 (99%)
Strand = Plus / Plus
Query: 334 aaagccgtttgccttattgatgggtgttgagtttctgctataaattcttatttattaact 393
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaagccgcttgccttattgatgggtgttgagtttctgctataaattcttatttattaact 60
Query: 394 ctttggcagtctaattggttttgtgttcccaaaaatggtttaattagttcaatttatttt 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctttggcagtctaattggttttgtgttcccaaaaatggtttaattagttcaatttatttt 120
Query: 454 aaatattaataagtggctgtgcaccgactcttgtaaacaaatccaaaatgtccgtaccta 513
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aattattaataagtggctgtgcaccgactcttgtaaacaaatccaaaatgtccgtaccta 180
Query: 514 gcactggtctgagcaaattgaaaaagaaacatattcgcgtgaaacatcaaaaagtgaaat 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcactggtctgagcaaattgaaaaagaaacatattcgcgtgaaacatcaaaaagtgaaat 240
Query: 574 tgtttcgtgctaatgaaccgttattgtctgtttttatgtggggagtaaatcatacgatta 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtttcgtgctaatgaaccgttattgtctgtttttatgtggggagtaaatcatacgatta 300
Query: 634 atgaactgagtcatgtctctatacccgtcatgttgttgcccgatgacttcagagcatact 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 301 atgaactgagtcatgtctctatacccgtcatgttgttgcccgatgacttcagagcgtact 360
Query: 694 ccaagctgaaggtggacaaccacctattcaacaaagagaacatgccatcccatttcaaag 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccaagctgaaggtggacaaccacctattcaacaaagagaacatgccatcccatttcaaag 420
Query: 754 ttaaggaatactgcccgctggtgttcaggaacctccgtgagaggttcgggatagatgatc 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttaaggaatactgcccgctggtgttcaggaacctccgtgagaggttcgggatagatgatc 480
Query: 814 tggattacaaggaatccttaaccaggt 840
|||||||||||||||||||||||||||
Sbjct: 481 tggattacaaggaatccttaaccaggt 507
Score = 494 bits (249), Expect = e-139
Identities = 264/271 (97%)
Strand = Plus / Plus
Query: 987 aggtcccagcctataccggacgattcgtcgggcaagtccggtgcgaagttctaccagagc 1046
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 504 aggtcccagcctataccggacgattcgtcgggcaagtccggtgccaagttctaccagagc 563
Query: 1047 tacgacaggctcttcatcctcaagaccctcacgtccgaggaagtcgagaggatgcactcc 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tacgacaggctcttcatcctcaagaccctcacgtccgaggaagtcgagaggatgcactcc 623
Query: 1107 ttcctcaagcattaccatccgtacatagtggagcgtcacggtaagaccttgctgcctcag 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttcctcaagcattaccatccgtacatagtggagcgtcacggtaagaccttgctgcctcag 683
Query: 1167 tacctggggatgtaccgactgaccgttgatggtatagagcactacctggtcgctacgagg 1226
||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tacctnnngatgtaccgactgaccgttgatggtatagagcactacctggtcgctacgnnn 743
Query: 1227 aacgtcttctccaaccacctcaatatacata 1257
|||||||||||||||||||||||||||||||
Sbjct: 744 aacgtcttctccaaccacctcaatatacata 774
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 284,050
Number of extensions: 6900
Number of successful extensions: 6900
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6900
Number of HSP's successfully gapped: 2
Length of query: 2383
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2366
Effective length of database: 8,119,229
Effective search space: 19210095814
Effective search space used: 19210095814
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)