BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03588 (UTR included)
(1339 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_541_C2 573 e-163
BF14_541_C1 462 e-130
BF14_729_C2 94 7e-19
BF01012A1E04 92 3e-18
BF01012A1B09 92 3e-18
BF01011A1H06 92 3e-18
BF01052B1F12 90 1e-17
BF01056A1B08 84 7e-16
BF01025B2E05 84 7e-16
BF01049A2D11 76 2e-13
BF01017A2H11 72 3e-12
>BF14_541_C2
Length = 831
Score = 573 bits (289), Expect = e-163
Identities = 289/289 (100%)
Strand = Plus / Plus
Query: 499 agatgttaaagataattcttatcttagccctggtgggttccatctaccctcaggacgata 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 agatgttaaagataattcttatcttagccctggtgggttccatctaccctcaggacgata 69
Query: 559 aggacttggattcagtgatcgagtctatatttggcaagccgtcttccacgcagccgccct 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 aggacttggattcagtgatcgagtctatatttggcaagccgtcttccacgcagccgccct 129
Query: 619 tcatcaacgtgaagaaaccatcaacaatagtacccccaaccaacaaccaagacaaagaga 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tcatcaacgtgaagaaaccatcaacaatagtacccccaaccaacaaccaagacaaagaga 189
Query: 679 accagccgtgtcagacggaagagggcaaggagggtcgctgtctgcggtacttcctctgca 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 accagccgtgtcagacggaagagggcaaggagggtcgctgtctgcggtacttcctctgca 249
Query: 739 actcaaacaacactgtcatagatgatggtgtaggaatcatagatataag 787
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 actcaaacaacactgtcatagatgatggtgtaggaatcatagatataag 298
>BF14_541_C1
Length = 1236
Score = 462 bits (233), Expect = e-130
Identities = 248/255 (97%)
Strand = Plus / Plus
Query: 533 gggttccatctaccctcaggacgataaggacttggattcagtgatcgagtctatatttgg 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gggttccatctaccctcaggacgataaggacttggattcagtgatcgagtctatnnnnnn 61
Query: 593 caagccgtcttccacgcagccgcccttcatcaacgtgaagaaaccatcaacaatagtacc 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 caagccgtcttccacgcagccgcccttcatcaacgtgaagaaaccatcaacaatagtacc 121
Query: 653 cccaaccaacaaccaagacaaagagaaccagccgtgtcagacggaagagggcaaggaggg 712
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cccagccaacaaccaagacaaagagaaccagccgtgtcagacggaagagggcaaggaggg 181
Query: 713 tcgctgtctgcggtacttcctctgcaactcaaacaacactgtcatagatgatggtgtagg 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tcgctgtctgcggtacttcctctgcaactcaaacaacactgtcatagatgatggtgtagg 241
Query: 773 aatcatagatataag 787
|||||||||||||||
Sbjct: 242 aatcatagatataag 256
>BF14_729_C2
Length = 1289
Score = 93.7 bits (47), Expect = 7e-19
Identities = 69/74 (93%), Gaps = 3/74 (4%)
Strand = Plus / Plus
Query: 1177 ttgctgaaaagtaaccgaaacgtcg--agtgtgtagtttttgaacaaaaataaatcacgc 1234
||||||||||||||||||||||||| ||| |||||||||| |||||||||||| |||||
Sbjct: 550 ttgctgaaaagtaaccgaaacgtcgggagtatgtagttttt-aacaaaaataaagcacgc 608
Query: 1235 gtagtttatccgaa 1248
||||||||||||||
Sbjct: 609 gtagtttatccgaa 622
>BF01012A1E04
Length = 841
Score = 91.7 bits (46), Expect = 3e-18
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 840 tgagacctaagattttcgcgagttttattcatttgaatgaaactaatata-tttcggata 898
||||| |||||| ||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 618 tgagatctaagactttcgcgagttttattcatttaaatgaaactaatatattttcggata 559
Query: 899 tactac 904
||||||
Sbjct: 558 tactac 553
>BF01012A1B09
Length = 841
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 839 atgagacctaagattttcgcgagttttattcatttgaatgaaactaatatatttcggata 898
|||||| |||||| | ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 705 atgagatctaagactgtcgcgagttttattcatttaaatgaaactaatatatttcggata 764
Query: 899 tactac 904
|||||
Sbjct: 765 cactac 770
>BF01011A1H06
Length = 739
Score = 91.7 bits (46), Expect = 3e-18
Identities = 77/85 (90%), Gaps = 3/85 (3%)
Strand = Plus / Plus
Query: 1180 ctgaaaagtaaccgaaacgtcg--agtgtgtagtttttgaacaaaaataaatcacgcgta 1237
|||||||||||||||||||||| ||| |||||| ||| | |||||||||||||||||||
Sbjct: 485 ctgaaaagtaaccgaaacgtcgggagtatgtagtctttta-caaaaataaatcacgcgta 543
Query: 1238 gtttatccgaaaaatattagcttca 1262
|||||||||||||||| ||| ||||
Sbjct: 544 gtttatccgaaaaatactagattca 568
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 836 ttaatgagacctaagattttcgcgagttttattcatttgaatgaaactaatatatttcgg 895
||||||||| ||||||||||||||| |||||||||||| |||||| ||| ||| ||||||
Sbjct: 609 ttaatgagatctaagattttcgcgacttttattcatttaaatgaatctagtatttttcgg 550
Query: 896 atatactac 904
||| |||||
Sbjct: 549 ataaactac 541
>BF01052B1F12
Length = 785
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 846 ctaagattttcgcgagttttattcatttgaatgaaactaatatatttcggatatact 902
|||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 304 ctaagaatttcgcgagttttattcatttaaatgaaactaatatttttcggatatact 360
>BF01056A1B08
Length = 761
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 839 atgagacctaagattttcgcgagttttattcatttgaatgaaactaatatattt 892
|||||| |||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 96 atgagatctaagactttcgcgagttttattcatttaaatgaaactaatatattt 149
>BF01025B2E05
Length = 759
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 835 attaatgagacctaagattttcgcgagttttattcatttgaatgaaactaatatattt 892
|||||||||| |||||| ||||||||||||||||||||| |||||||||| |||||||
Sbjct: 123 attaatgagatctaagactttcgcgagttttattcatttaaatgaaactagtatattt 66
>BF01049A2D11
Length = 776
Score = 75.8 bits (38), Expect = 2e-13
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 1220 aaaaataaatcacgcgtagtttatccgaaaaatattag 1257
||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aaaaataaatcacgcgtagtttatccgaaaaatattag 552
>BF01017A2H11
Length = 713
Score = 71.9 bits (36), Expect = 3e-12
Identities = 68/78 (87%), Gaps = 3/78 (3%)
Strand = Plus / Plus
Query: 1177 ttgctgaaaagtaaccgaaacgtcgagtgtgt---agtttttgaacaaaaataaatcacg 1233
|||||||||||||||| |||||||| | || | ||||||| ||||||||||| ||||
Sbjct: 55 ttgctgaaaagtaaccaaaacgtcgggagtatnnnagtttttttacaaaaataaagcacg 114
Query: 1234 cgtagtttatccgaaaaa 1251
||||||||||||||||||
Sbjct: 115 cgtagtttatccgaaaaa 132
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 171,858
Number of extensions: 4115
Number of successful extensions: 4115
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 4111
Number of HSP's successfully gapped: 12
Length of query: 1339
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1322
Effective length of database: 8,119,229
Effective search space: 10733620738
Effective search space used: 10733620738
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)